Evidence map›Paper›PMID 36725708›Full record

ArticleSe pu = Chinese journal of chromatography2023

[Analysis and identification of suspected snake venom samples using nano-ultra-high performance liquid chromatography-high resolution mass spectrometry].

Zehua Li, Chuang Wang, Bin Xu, Jia Chen, Ying Zhang, Lei Guo, Jianwei Xie

Open access · bronzeAbstract readEnglish Abstract
In one paragraph

Article in Se pu = Chinese journal of chromatography, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zehua Li1. State Key Laboratory of Toxicology and Medical Countermeasures,Institute of Pharmacology and Toxicology,Academy of Military Medical Sciences,Beijing 100850,China.
Chuang Wang1. State Key Laboratory of Toxicology and Medical Countermeasures,Institute of Pharmacology and Toxicology,Academy of Military Medical Sciences,Beijing 100850,China;2. Key Laboratory of Ethnic Medicine,Ministry of Education,College of Pharmacy,Minzu University of China,Beijing 100081,China.
Bin Xu1. State Key Laboratory of Toxicology and Medical Countermeasures,Institute of Pharmacology and Toxicology,Academy of Military Medical Sciences,Beijing 100850,China.
Jia Chen1. State Key Laboratory of Toxicology and Medical Countermeasures,Institute of Pharmacology and Toxicology,Academy of Military Medical Sciences,Beijing 100850,China.
Ying Zhang3. Forensic Science Service of Beijing Public Security Bureau,Key Laboratory of Forensic Toxicology,Ministry of Public Security,Beijing 100192,China.
Lei Guo1. State Key Laboratory of Toxicology and Medical Countermeasures,Institute of Pharmacology and Toxicology,Academy of Military Medical Sciences,Beijing 100850,China.
Jianwei Xie1. State Key Laboratory of Toxicology and Medical Countermeasures,Institute of Pharmacology and Toxicology,Academy of Military Medical Sciences,Beijing 100850,China.
Academy of Military Medical Sciences · CNMinistry of Public Security of the People's Republic of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Snake venom is a complex mixture secreted from the glands of poisonous snakes, which contains proteins, peptides, lipids, nucleosides, sugars, amino acids, amines, metal ions, and other components. According to the toxicological classification, snake venoms can be classified as neurotoxins, anticoagulants and procoagulant toxins, cardiac toxins, other toxin proteins, and enzymes. Proteins and peptides are the key components of snake venom. The establishment of rapid, accurate analysis and identification methods for proteins in snake venom is a prerequisite for snake venom-related forensic identification, intoxication events, and pharmaceutical development. Until now, the classical analysis and identification methods have mainly been biochemical or immunoassays for DNA or proteins, such as polymerase chain reaction, agglutination test, enzyme-linked immunosorbent assay, fluorescent immunoassay, and various biosensing approaches. These methods have some limitations such as a high false-positive ratio, low sensitivity, poor anti-interference ability, and limited species discrimination capability. In recent years, with the rapid development of mass spectrometry (MS) techniques, the proteomics of snake venom has also attracted much attention and has contributed to the identification of snake species, in which non-targeted and targeted proteomics represent two main divisions. However, species identification via proteomics is in its infancy in forensic science. First, the tandem MS spectra of peptide sequences are highly complex, which poses a great challenge for the strict and accurate matching of peptides based on the rational speculation of MS fragmentation rules and theoretical calculations in non-targeted proteomics. Second, for the confirmation and identification of unknown substances, reference substances are commonly needed, but those for snake venom are lacking. Proteomics in snake venom identification is still in progress to improve the identification confidence and clarify the identification rules. In this work, a method based on nano-ultra-high performance liquid chromatography-quadrupole-orbitrap high-resolution mass spectrometry (Nano LC-MS/HRMS) and size exclusion chromatography (SEC) was developed for identifying proteins and their source species, with strict rules for five suspected snake venom samples and their contamination in one case. Three SEC elution peaks were obtained from each of the five samples, which were lyophilized and treated with trypsin in solution, and then separated and analyzed by Nano LC-MS/HRMS. First, the Full MS/dd MS

Indexed as

ProteinsSnake VenomsChromatography, High Pressure LiquidPeptidesProteomeTandem Mass SpectrometryPeptidesProteinsProteomeSnake Venomshigh resolution mass spectrometry (HRMS)nano-ultra-high performance liquid chromatography (Nano LC)parallel reaction monitoringproteomicssnake venom

Identifiers

PMID36725708
PMCPMC9892974
OpenAlexW4318934439

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.