Evidence map›Paper›PMID 36724094›Full record

ArticleAnalytical chemistry2023

Single Cerebral Organoid Mass Spectrometry of Cell-Specific Protein and Glycosphingolipid Traits.

Markéta Nezvedová, Durga Jha, Tereza Váňová, Darshak Gadara, Hana Klímová, Jan Raška, Lukáš Opálka, Dáša Bohačiaková, Zdeněk Spáčil

Open access · hybridFull text read
In one paragraph

Article in Analytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Single-Cell Protein Assays in Context: From 2D to 3D and In Situ Analysis.Annual review of analytical chemistry (Palo Alto, Calif.) · 2026
    Review
  3. Article
  4. Review
  5. Human Brain Organoids: Development and Applications.Journal of microbiology and biotechnology · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Markéta NezvedováRECETOX, Faculty of Science, Masaryk University, Brno 625 00, Czech Republic.
Durga JhaRECETOX, Faculty of Science, Masaryk University, Brno 625 00, Czech Republic.
Tereza VáňováDepartment of Histology and Embryology, Faculty of Medicine, Masaryk University, Brno 625 00, Czech Republic.
Darshak GadaraRECETOX, Faculty of Science, Masaryk University, Brno 625 00, Czech Republic.ORCID 0000-0002-3141-8990
Hana KlímováDepartment of Histology and Embryology, Faculty of Medicine, Masaryk University, Brno 625 00, Czech Republic.
Jan RaškaDepartment of Histology and Embryology, Faculty of Medicine, Masaryk University, Brno 625 00, Czech Republic.
Lukáš OpálkaDepartment of Chemistry, Faculty of Pharmacy, Charles University, Hradec Králové 500 05, Czech Republic.
Dáša BohačiakováDepartment of Histology and Embryology, Faculty of Medicine, Masaryk University, Brno 625 00, Czech Republic.
Zdeněk SpáčilRECETOX, Faculty of Science, Masaryk University, Brno 625 00, Czech Republic.ORCID 0000-0002-7505-4332
Masaryk University · CZCharles University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cerebral organoids are a prolific research topic and an emerging model system for neurological diseases in human neurobiology. However, the batch-to-batch reproducibility of current cultivation protocols is challenging and thus requires a high-throughput methodology to comprehensively characterize cerebral organoid cytoarchitecture and neural development. We report a mass spectrometry-based protocol to quantify neural tissue cell markers, cell surface lipids, and housekeeping proteins in a single organoid. Profiled traits probe the development of neural stem cells, radial glial cells, neurons, and astrocytes. We assessed the cell population heterogeneity in individually profiled organoids in the early and late neurogenesis stages. Here, we present a unifying view of cell-type specificity of profiled protein and lipid traits in neural tissue. Our workflow characterizes the cytoarchitecture, differentiation stage, and batch cultivation variation on an individual cerebral organoid level.

Indexed as

Neural Stem CellsOrganoidsCell DifferentiationHumansMass SpectrometryNeuronsReproducibility of Results

Identifiers

PMID36724094
PMCPMC10016744
OpenAlexW4318754996

What OpenQuestion holds

Textfull text, public
LicenceCC BY
reference markers read1
measurements read79
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.