Evidence map›Paper›PMID 36722076›Full record

ArticleProceedings. Biological sciences2023

A 17-year time-series of fungal environmental DNA from a coastal marine ecosystem reveals long-term seasonal-scale and inter-annual diversity patterns.

Nathan Chrismas, Ro Allen, Michael J Allen, Kimberley Bird, Michael Cunliffe

Abstract read
In one paragraph

Article in Proceedings. Biological sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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  11. The genome sequence of a marine yeast,Wellcome open research · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nathan ChrismasMarine Biological Association, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK.ORCID 0000-0002-2165-3102
Ro AllenMarine Biological Association, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK.
Michael J AllenCollege of Life and Environmental Sciences, University of Exeter, Exeter EX4 4PY, UK.
Kimberley BirdMarine Biological Association, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK.
Michael CunliffeMarine Biological Association, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK.ORCID 0000-0002-6716-3555

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changing patterns in diversity are a feature of many habitats, with seasonality a major driver of ecosystem structure and function. In coastal marine plankton-based ecosystems, seasonality has been established through long-term time-series of bacterioplankton and protists. Alongside these groups, fungi also inhabit coastal marine ecosystems. If and how marine fungi show long-term intra- and inter-annual diversity patterns is unknown, preventing a comprehensive understanding of marine fungal ecology. Here, we use a 17-year environmental DNA time-series from the English Channel to determine long-term marine fungal diversity patterns. We show that fungal community structure progresses at seasonal and monthly scales and is only weakly related to environmental parameters. Communities restructured every 52-weeks suggesting long-term stability in diversity patterns. Some major marine fungal genera have clear inter-annual recurrence patterns, re-appearing in the annual cycle at the same period. Low relative abundance taxa that are likely non-marine show seasonal input to the coastal marine ecosystem suggesting land-sea exchange regularly takes place. Our results demonstrate long-term intra- and inter-annual marine fungal diversity patterns. We anticipate this study could form the basis for better understanding the ecology of marine fungi and how they fit in the structure and function of the wider coastal marine ecosystem.

Indexed as

DNA, EnvironmentalDNA, FungalEcosystemEcologySeasonsSeawaterDNA, EnvironmentalDNA, Fungalmarine ecosystemmarine fungiplanktonseasonality

Identifiers

PMID36722076
PMCPMC9890122

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.