Evidence map›Paper›PMID 36717752›Full record

ArticleNature metabolism2023

Integrated multi-omics reveals anaplerotic rewiring in methylmalonyl-CoA mutase deficiency.

Patrick Forny, Ximena Bonilla, David Lamparter, Wenguang Shao, Tanja Plessl, Caroline Frei, Anna Bingisser, Sandra Goetze, Audrey van Drogen, Keith Harshman and 17 more

Open access · hybridAbstract read
In one paragraph

Article in Nature metabolism, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
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  4. Observational
  5. Article
  6. Article
  7. Immune Dysregulation in Branched Chain Organic Acidemias.Journal of inherited metabolic disease · 2026
    Review
  8. Article
  9. [N-carbamylglutamate in the treatment of neonatal organic acidemia crisis: a report of five cases].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2026
    Article
  10. Article
  11. Article
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  13. Cooperative Architecture of Mitochondrial Proteome Homeostasis.medRxiv : the preprint server for health sciences · 2026
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 4 institutions in 2 countries.

Patrick Forny *Division of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.ORCID 0000-0003-1877-2976
Ximena Bonilla *Biomedical Informatics, Department of Computer Science, Swiss Federal Institute of Technology/ETH Zürich, Zurich, Switzerland.ORCID 0000-0002-4950-6825
David Lamparter *Health 2030 Genome Center, Geneva, Switzerland.
Wenguang Shao *PHRT Swiss Multi-Omics Center, smoc.ethz.ch, Zurich, Switzerland.
Tanja PlesslDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Caroline FreiDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-8879-6327
Anna BingisserDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Sandra GoetzePHRT Swiss Multi-Omics Center, smoc.ethz.ch, Zurich, Switzerland.ORCID 0000-0001-6880-8020
Audrey van DrogenPHRT Swiss Multi-Omics Center, smoc.ethz.ch, Zurich, Switzerland.
Keith HarshmanHealth 2030 Genome Center, Geneva, Switzerland.
Patrick G A PedrioliPHRT Swiss Multi-Omics Center, smoc.ethz.ch, Zurich, Switzerland.
Cedric HowaldHealth 2030 Genome Center, Geneva, Switzerland.
Martin PomsDivision of Clinical Chemistry, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Florian TraversiDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Céline BürerDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Sarah CherkaouiDivision of Oncology and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Raphael J MorscherDivision of Oncology and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.ORCID 0000-0003-3378-9266
Luke SimmonsDivision of Child Neurology, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Merima FornyDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland.
Ioannis XenariosPHRT Swiss Multi-Omics Center, smoc.ethz.ch, Zurich, Switzerland.
Ruedi AebersoldDepartment of Biology, Institute of Molecular Systems Biology, Swiss Federal Institute of Technology/ETH Zürich, Zurich, Switzerland.
Nicola ZamboniPHRT Swiss Multi-Omics Center, smoc.ethz.ch, Zurich, Switzerland.
Gunnar RätschBiomedical Informatics, Department of Computer Science, Swiss Federal Institute of Technology/ETH Zürich, Zurich, Switzerland. Gunnar.Raetsch@inf.ethz.ch.ORCID 0000-0001-5486-8532
Emmanouil T DermitzakisHealth 2030 Genome Center, Geneva, Switzerland. emmanouil.dermitzakis@gmail.com.
Bernd WollscheidPHRT Swiss Multi-Omics Center, smoc.ethz.ch, Zurich, Switzerland. bernd.wollscheid@hest.ethz.ch.
Matthias R BaumgartnerDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland. matthias.baumgartner@kispi.uzh.ch.ORCID 0000-0002-9270-0826
D Sean FroeseDivision of Metabolism and Children's Research Center, University Children's Hospital Zurich, University of Zurich, Zurich, Switzerland. sean.froese@kispi.uzh.ch.ORCID 0000-0003-1557-3517
University of Zurich · CHETH Zurich · CHSIB Swiss Institute of Bioinformatics · CHUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methylmalonic aciduria (MMA) is an inborn error of metabolism with multiple monogenic causes and a poorly understood pathogenesis, leading to the absence of effective causal treatments. Here we employ multi-layered omics profiling combined with biochemical and clinical features of individuals with MMA to reveal a molecular diagnosis for 177 out of 210 (84%) cases, the majority (148) of whom display pathogenic variants in methylmalonyl-CoA mutase (MMUT). Stratification of these data layers by disease severity shows dysregulation of the tricarboxylic acid cycle and its replenishment (anaplerosis) by glutamine. The relevance of these disturbances is evidenced by multi-organ metabolomics of a hemizygous Mmut mouse model as well as through identification of physical interactions between MMUT and glutamine anaplerotic enzymes. Using stable-isotope tracing, we find that treatment with dimethyl-oxoglutarate restores deficient tricarboxylic acid cycling. Our work highlights glutamine anaplerosis as a potential therapeutic intervention point in MMA.

Indexed as

Metabolism, Inborn ErrorsMethylmalonyl-CoA MutaseAmino Acid Metabolism, Inborn ErrorsAnimalsGlutamineMiceMultiomicsGlutamineMethylmalonyl-CoA Mutase

Identifiers

PMID36717752
PMCPMC9886552
OpenAlexW4318486484

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.