Evidence map›Paper›PMID 36715855›Full record

ArticleJournal of cell communication and signaling2023

A network map of GDNF/RET signaling pathway in physiological and pathological conditions.

Praseeda Mol, Rex Devasahayam Arokia Balaya, Shobha Dagamajalu, Sreeranjini Babu, Pavithra Chandrasekaran, Reshma Raghavan, Sneha Suresh, Namitha Ravishankara, Anu Hemalatha Raju, Bipin Nair and 4 more

Open access · greenAbstract read
In one paragraph

Article in Journal of cell communication and signaling, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 8 citations in OpenAlex.

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  9. Assessment of CRISPRa-mediatedFrontiers in bioengineering and biotechnology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Praseeda MolInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.ORCID http://orcid.org/0000-0001-9434-5058
Rex Devasahayam Arokia BalayaCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India. rexprem@yenepoya.edu.in.ORCID http://orcid.org/0000-0002-9556-3150
Shobha DagamajaluCenter for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to Be University), Mangalore, 575018, India. shobha_d@yenepoya.edu.in.ORCID http://orcid.org/0000-0002-0899-2839
Sreeranjini BabuCenter for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Pavithra ChandrasekaranInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Reshma RaghavanInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Sneha SureshInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Namitha RavishankaraInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Anu Hemalatha RajuInstitute of Bioinformatics, International Technology Park, Whitefield, Bangalore, 560066, India.
Bipin NairAmrita School of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690525, India.
Prashant Kumar ModiCenter for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to Be University), Mangalore, 575018, India.
Anita MahadevanDepartment of Neuropathology, National Institute of Mental Health and Neurosciences, Bangalore, 560029, India.ORCID http://orcid.org/0000-0002-4837-1463
Thottethodi Subrahmanya Keshava PrasadCenter for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to Be University), Mangalore, 575018, India. keshav@yenepoya.edu.in.ORCID http://orcid.org/0000-0002-6206-2384
Rajesh RajuCentre for Integrative Omics Data Science, Yenepoya (Deemed to Be University), Mangalore, 575018, India. rajeshraju@yenepoya.edu.in.ORCID http://orcid.org/0000-0003-2319-121X
Institute of Bioinformatics · INYenepoya University · INAmrita Vishwa Vidyapeetham · INNational Institute of Mental Health and Neurosciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glial cell line-derived neurotrophic factor (GDNF) signals through a multi-component receptor system predominantly consisting of glycosyl-phosphatidylinositol-anchored GDNF family receptor alpha-1 (GFRα1) and the Rearranged during transfection (RET) receptor tyrosine kinase. GDNF/RET signaling is vital to the central and peripheral nervous system, kidney morphogenesis, and spermatogenesis. In addition, the dysregulation of the GDNF/RET signaling has been implicated in the pathogenesis of cancers. Despite the extensive research on GDNF/RET signaling, a molecular network of reactions induced by GDNF reported across the published literature. However, a comprehensive GDNF/RET pathway resource is currently unavailable. We describe an integrated signaling pathway reaction map of GDNF/RET consisting of 1151 molecular reactions. These include information pertaining to 52 molecular association events, 70 enzyme catalysis events, 36 activation/inhibition events, 22 translocation events, 856 gene regulation events, and 115 protein-level expression events induced by GDNF in diverse cell types. We developed a comprehensive GDNF/RET signaling network map based on these molecular reactions. The pathway map was made accessible through WikiPathways database ( https://www.wikipathways.org/index.php/Pathway:WP5143 ). Biocuration and development of gene regulatory network map of GDNF/RET signaling pathway.

Indexed as

Multi-component receptor systemPost-translational modificationsProtein–protein interactionsReceptor tyrosine kinasesSignaling network

Identifiers

PMID36715855
PMCPMC10409931
OpenAlexW4318473028

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.