Evidence map›Paper›PMID 36715784›Full record

ArticleThe protein journal2023

Enzyme Kinetics Features of the Representative Engineered Recombinants of Chondroitinase ABC I.

Khadijeh Moradi, Zahra Bayani, Vahab Jafarian, Akram Shirdel

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Article in The protein journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Khadijeh MoradiDepartment of Biology, Faculty of Sciences, University of Zanjan, Zanjan, Iran.
Zahra BayaniDepartment of Biology, Faculty of Sciences, University of Zanjan, Zanjan, Iran.
Vahab JafarianDepartment of Biology, Faculty of Sciences, University of Zanjan, Zanjan, Iran. V.Jafarian@znu.ac.ir.ORCID 0000-0002-8396-3894
Akram ShirdelDepartment of Biology, Faculty of Sciences, University of Zanjan, Zanjan, Iran. a.shirdel@modares.ac.ir.ORCID 0000-0002-3820-8953

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chondroitinase ABC I (cABC I) from Proteus vulgaris is an important enzyme in medicinal biotechnology due to its ability to help axon regeneration after spinal cord injury. Its practical application involves solving several problems at the molecular and cellular levels. Structurally, most residues at the C-terminal domain of cABC I are arranged as organized strands, and only a small fraction of residues have helical conformation. The structural and functional features of modified residues on two specific helix fragments have previously been reported. The single mutant M889K has been combined with L679S and L679D mutants to make enzyme variants containing simultaneously modified helix. Here, the pH stability and temperature-based analysis of the transition state structure for the catalysis reaction were investigated. We found that double mutant L679D/M889K is the better choice to use in physiological conditions due to its higher pH stability at physiological pH as well as its different optimum temperature as compared with the (wild-type) WT protein. According to Arrhenius's analysis, the values of the Gibbs free energy of the transition state (∆G

Indexed as

AxonsChondroitin ABC LyaseEnzyme StabilityKineticsNerve RegenerationTemperatureChondroitin ABC LyaseArrhenius equationChondroitinase ABC IEnzymeHelixTransition state

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.