Evidence map›Paper›PMID 36715622›Full record

ArticleJournal of experimental botany2023

A novel mutant allele of AtCNGC15 reveals a dual function of nuclear calcium release in the root meristem.

Emily Tipper, Nuno Leitão, Pierre Dangeville, David M Lawson, Myriam Charpentier

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emily TipperDepartment of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.ORCID 0000-0002-8146-0054
Nuno LeitãoDepartment of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.ORCID 0000-0002-8802-5215
Pierre DangevilleDepartment of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.ORCID 0000-0001-8492-9981
David M LawsonDepartment of Biological Chemistry, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.ORCID 0000-0002-7637-4303
Myriam CharpentierDepartment of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.ORCID 0000-0003-3784-3039
John Innes Centre · GB

Funding

Biotechnology and Biological Sciences Research Council BB/P007112/1
6 · The paper itself

Abstract

Calcium release to the nucleoplasm of root meristem cells was demonstrated to modulate root development. The calcium channel encoded by cyclic nucleotide-gated channel (CNGC) 15 localizes at the nuclear envelope in young Arabidopsis seedlings. In contrast, at later stages of root growth, overexpression analysis showed that AtCNGC15 can relocalize to the plasma membrane to mediate primary nitrate-induced gene expression. This raises the question as to whether nuclear localized AtCNGC15 is required for root apical meristem development in young Arabidopsis seedlings, and whether nitrate signalling occurs independently of nuclear localized AtCNGC15 at this developmental stage. In this study, we characterize a novel mutant allele of AtCNGC15 and demonstrate that the mutation of a highly conserved aspartic acid in the C-linker domain is sufficient to impair the gating of AtCNCG15. We demonstrate that AtCNGC15 mediates the nuclear calcium release that modulates root apical meristem development and nitrate-induced LBD39 expression. We also show that, in the presence of nitrate, the relocalization of AtCNGC15 at the plasma membrane occurs specifically in the columella cells. Our results further suggest that the induction of LBD37, LBD38, and LBD39 in the presence of nitrate is modulated by different inputs of cytoplasmic or nuclear calcium release.

Indexed as

ArabidopsisArabidopsis ProteinsAllelesCalciumGene Expression Regulation, PlantMeristemNitratesPlant RootsPotassium ChannelsSeedlingsArabidopsis ProteinsAT2G28260 protein, ArabidopsisCalciumNitratesPotassium ChannelsArabidopsiscalcium signallingcyclic nucleotide gated channellateral organ boundaries domainnitrateroot development

Identifiers

PMID36715622
PMCPMC10112680
OpenAlexW4318542342

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.