Evidence map›Paper›PMID 36713363›Full record

ArticleFrontiers in immunology2022

Diagnostic and prognostic value of

Libo Sun, Junfeng Lu, Kang Li, Haitao Zhang, Xiaofei Zhao, Guangming Li, Ning Li

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Libo SunGeneral Surgery Center, Beijing YouAn Hospital, Capital Medical University, Beijing, China.
Junfeng LuDepartment of Liver Disease Center, Beijing YouAn Hospital, Capital Medical University, Beijing, China.
Kang LiBiomedical Information Center, Beijing YouAn Hospital, Capital Medical University, Beijing, China.
Haitao ZhangGeneral Surgery Center, Beijing YouAn Hospital, Capital Medical University, Beijing, China.
Xiaofei ZhaoGeneral Surgery Center, Beijing YouAn Hospital, Capital Medical University, Beijing, China.
Guangming LiGeneral Surgery Center, Beijing YouAn Hospital, Capital Medical University, Beijing, China.
Ning LiGeneral Surgery Center, Beijing YouAn Hospital, Capital Medical University, Beijing, China.
Beijing YouAn Hospital · CNCapital Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Although we had identified that the methylation of AHNAK was a good diagnostic marker for hepatopathy, here we speculate that there was also another marker, STAP1, whose methylation also involved in the detection of hepatopathy. Methods: We investigated the methylation levels of the AHNAK and STAP1 in peripheral blood mononuclear cells of chronic hepatitis B (CHB) patients, compensatory liver cirrhosis (CLC) patients, decompensated liver cirrhosis (DCLC) patients, hepatocellular carcinoma (HCC) patients and healthy controls by methylation-specific PCR. We also evaluated the differences and changes of methylation and expression of AHNAK and STAP1 at different stages of liver disease using the TCGA and GEO public datasets. Results: Methylation level of STAP1 in PBMC was positively correlated with the course of liver cancer. The combination of AHNAK and STAP1 methylation was able to predict differrent HBV related hepatopathy. The GEO datasets also supported that the methylation of AHNAK and STAP1 was associated with different types of hepatopathy. The TCGA data showed that the levels of methylation and expression of STAP1 were down-regulated in HCC. We also found the STAP1 methylation level in PBMC and T cells was associated with age, gender, alcohol drinking and anti-HBe. Hyper-methylation of STAP1 was correlated with the poor prognosis of patients but its expression had no association. Conclusion: We concluded that combination of AHNAK and STAP1 methylation in peripheral blood immune cells can be used as a diagnostic marker for HBV related hepatopathy and STAP1 methylation may be a potential prognostic marker for HBV related HCC. Our clinical study registration number was ChiCTR2000039860.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsAdaptor Proteins, Signal TransducingDNA MethylationHepatitis B virusHumansLeukocytes, MononuclearLiver CirrhosisMembrane ProteinsNeoplasm ProteinsPrognosisAdaptor Proteins, Signal TransducingAHNAK protein, humanMembrane ProteinsNeoplasm ProteinsSTAP1 protein, humanAHNAKdiagnosisDNA methylationHBVhepatopathyprognosisSTAP1

Identifiers

PMID36713363
PMCPMC9880311
OpenAlexW4315797466

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.