Evidence map›Paper›PMID 36713328›Full record

ArticlePNAS nexus2022

Omicron variant of SARS-CoV-2 exhibits an increased resilience to the antiviral type I interferon response.

Lyudmila Shalamova, Ulrike Felgenhauer, Jochen Wilhelm, Andreas R Schaubmar, Kathrin Büttner, Andreas Schoen, Marek Widera, Sandra Ciesek, Friedemann Weber

Open access · goldAbstract read
In one paragraph

Article in PNAS nexus, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 28 citations in OpenAlex.

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  10. SARS-CoV-2 nsp15 endoribonuclease antagonizes dsRNA-induced antiviral signaling.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Lyudmila ShalamovaInstitute for Virology, FB10-Veterinary Medicine, Justus-Liebig University, D-35392 Giessen, Germany.ORCID https://orcid.org/0000-0002-4393-1281
Ulrike FelgenhauerInstitute for Virology, FB10-Veterinary Medicine, Justus-Liebig University, D-35392 Giessen, Germany.ORCID https://orcid.org/0000-0002-9478-5368
Jochen WilhelmInstitute for Lung Health (ILH), Justus-Liebig-University Giessen , D-35392 Giessen, Germany.ORCID https://orcid.org/0000-0001-5544-9647
Andreas R SchaubmarUnit for Biomathematics and Data processing, FB10-Veterinary Medicine, Justus-Liebig University, D-35392 Giessen, Germany.ORCID https://orcid.org/0000-0002-4366-8102
Kathrin BüttnerUnit for Biomathematics and Data processing, FB10-Veterinary Medicine, Justus-Liebig University, D-35392 Giessen, Germany.
Andreas SchoenInstitute for Virology, FB10-Veterinary Medicine, Justus-Liebig University, D-35392 Giessen, Germany.ORCID https://orcid.org/0000-0002-1711-4800
Marek WideraInstitute for Medical Virology, University Hospital, Goethe University, D-60596 Frankfurt am Main, Germany.ORCID https://orcid.org/0000-0001-5417-9307
Sandra CiesekInstitute for Medical Virology, University Hospital, Goethe University, D-60596 Frankfurt am Main, Germany.
Friedemann WeberInstitute for Virology, FB10-Veterinary Medicine, Justus-Liebig University, D-35392 Giessen, Germany.ORCID https://orcid.org/0000-0001-9737-337X
Justus-Liebig-Universität Gießen · DEGoethe University Frankfurt · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The new variant of concern (VOC) of SARS-CoV-2, Omicron (B.1.1.529), is genetically very different from other VOCs. We compared Omicron with the preceding VOC Delta (B.1.617.2) and the wildtype (wt) strain (B.1) with respect to their interactions with the antiviral interferon (IFN-alpha/beta) response in infected cells. Our data indicate that IFN induction by Omicron is low and comparable to the wt, whereas Delta showed an increased IFN induction. However, Omicron exceeded both the wt and the Delta strain with respect to the ability to withstand the antiviral state imposed by IFN-alpha.

Indexed as

COVID-19interferon inductioninterferon sensitivityOmicron variant BA.1SARS-CoV-2

Identifiers

PMID36713328
PMCPMC9802332
OpenAlexW4281289039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.