Evidence map›Paper›PMID 36713323›Full record

ArticlePNAS nexus2022

Ranking the information content of distance measures.

Aldo Glielmo, Claudio Zeni, Bingqing Cheng, Gábor Csányi, Alessandro Laio

Abstract read
In one paragraph

Article in PNAS nexus, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
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  5. Article
  6. Article
  7. Robust inference of causality in high-dimensional dynamical processes from the Information Imbalance of distance ranks.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Aldo GlielmoPhysics Department, International School for Advanced Studies (SISSA), Via Bonomea 265, 34136 Trieste, Italy.ORCID https://orcid.org/0000-0002-4737-2878
Claudio ZeniPhysics Department, International School for Advanced Studies (SISSA), Via Bonomea 265, 34136 Trieste, Italy.
Bingqing ChengThe Institute of Science and Technology Austria, Am Campus 1, 3400 Klosterneuburg, Austria.ORCID https://orcid.org/0000-0002-3584-9632
Gábor CsányiEngineering Laboratory, University of Cambridge, Trumpington St, CB21PZ Cambridge, UK.
Alessandro LaioPhysics Department, International School for Advanced Studies (SISSA), Via Bonomea 265, 34136 Trieste, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Real-world data typically contain a large number of features that are often heterogeneous in nature, relevance, and also units of measure. When assessing the similarity between data points, one can build various distance measures using subsets of these features. Finding a small set of features that still retains sufficient information about the dataset is important for the successful application of many statistical learning approaches. We introduce a statistical test that can assess the relative information retained when using 2 different distance measures, and determine if they are equivalent, independent, or if one is more informative than the other. This ranking can in turn be used to identify the most informative distance measure and, therefore, the most informative set of features, out of a pool of candidates. To illustrate the general applicability of our approach, we show that it reproduces the known importance ranking of policy variables for Covid-19 control, and also identifies compact yet informative descriptors for atomic structures. We further provide initial evidence that the information asymmetry measured by the proposed test can be used to infer relationships of causality between the features of a dataset. The method is general and should be applicable to many branches of science.

Indexed as

causality detectionfeature selectioninformation theory

Identifiers

PMID36713323
PMCPMC9802303

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.