Evidence map›Paper›PMID 36711586›Full record

ArticlebioRxiv : the preprint server for biology2023

Selection of Extended CRISPR RNAs with Enhanced Targeting and Specificity.

Ashley Herring-Nicholas, Hillary Dimig, Miranda Roesing, Eric A Josephs

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Ashley Herring-NicholasDepartment of Nanoscience, The University of North Carolina at Greensboro, Greensboro, North Carolina, 27401, USA.
Hillary DimigDepartment of Nanoscience, The University of North Carolina at Greensboro, Greensboro, North Carolina, 27401, USA.
Miranda RoesingDepartment of Nanoscience, The University of North Carolina at Greensboro, Greensboro, North Carolina, 27401, USA.
Eric A JosephsDepartment of Nanoscience, The University of North Carolina at Greensboro, Greensboro, North Carolina, 27401, USA.

Funding

Complex Mechanisms of Mutation and Mutation Avoidance in Living CellsR35GM133483 · NIGMS · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI JOSEPHS, ERIC ALAN · 2019 to 2023
$1.6M
A Molecular Grammar for Guide RNAs (gRNAs) with Engineered Secondary StructuresR21EB033595 · NIBIB · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI JOSEPHS, ERIC ALAN, MO, YIRONG · 2022 to 2023
$400k
NIBIB NIH HHS R21 EB033595NIGMS NIH HHS R35 GM133483
6 · The paper itself

Abstract

For a CRISPR guide RNA (gRNA) with a specific target but activity at known "off-target" sequences, we present a method to screen hundreds of thousands of gRNA variants with short, randomized 5' nucleotide extensions near its DNA-targeting segment-a modification that can increase Cas9 gene editing specificity by orders of magnitude with certain 5'- extension sequences,

Identifiers

PMID36711586
PMCPMC9882064

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.