Evidence map›Paper›PMID 36711278›Full record

ArticleHeliyon2023

Identifying M1-like macrophage related genes for prognosis prediction in lung adenocarcinoma based on a gene co-expression network.

Zhiyuan Wang, Shan Yan, Ying Yang, Xuan Luo, Xiaofang Wang, Kun Tang, Juan Zhao, Yongwen He, Li Bian

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Roles of naïve CD4Journal of translational medicine · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zhiyuan WangSchool of Basic Medicine, Kunming Medical University, Kunming, 650500, China.
Shan YanInstitute of Biomedical Engineering, Kunming Medical University, Kunming, 650031, China.
Ying YangDepartment of Pathology, The First Affiliated Hospital of Kunming Medical University, Kunming, 650031, China.
Xuan LuoSchool of Basic Medicine, Kunming Medical University, Kunming, 650500, China.
Xiaofang WangDepartment of Pathology, The Second Affiliated Hospital of Kunming Medical University, Kunming, 650031, China.
Kun TangIntensive Care Unit, The First Affiliated Hospital of Kunming Medical University, Kunming, 650031, China.
Juan ZhaoSchool of Basic Medicine, Kunming Medical University, Kunming, 650500, China.
Yongwen HeSchool of Stomatology, Kunming Medical University, Kunming, 650021, China.
Li BianDepartment of Pathology, The First Affiliated Hospital of Kunming Medical University, Kunming, 650031, China.
Kunming Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Macrophages are one of the most important players in the tumor microenvironment. But the contribution of macrophages to lung adenocarcinoma (LUAD) is still controversial. The current study aimed to display an immune landscape to clarify the function of macrophages and detect prognostic hub genes in LUAD. The transcriptome data were adopted to screen differently expressed genes (DEGs) in The Cancer Genome Atlas database (TCGA). The cell type identification by estimating relative subsets of RNA transcripts (CIBERSORT) algorithm was used to reveal the immune landscape. Weighted gene co-expression network analysis (WGCNA) analysis was performed to identify the hub module associated with macrophages. Function Enrichment analysis was conducted on hub module genes. Moreover, univariate and multivariate Cox regression analyses were performed to identify prognostic hub genes. Kaplan-Meier (KM) and Time-dependent receiver operating characteristic (ROC) curves were plotted to assess the prognostic capacity of the four prognostic hub genes. The GES1196959 dataset from the Gene Expression Omnibus (GEO) database was downloaded to verify the differential expression of the 4 prognostic hub genes.

Indexed as

Immune landscapeLung adenocarcinomaMacrophagesPrognostic hub genesWGCNA

Identifiers

PMID36711278
PMCPMC9876840
OpenAlexW4313491996

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.