Evidence map›Paper›PMID 36710869›Full record

ArticlePeerJ2023

Assessing the breeding phenology of a threatened frog species using eDNA and automatic acoustic monitoring.

Ying Chen, Orianne Tournayre, Haolun Tian, Stephen C Lougheed

Abstract read
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ying Chen *Biology, Queen's University, Kingston, Ontario, Canada.ORCID 0000-0002-2237-6426
Orianne Tournayre *Biology, Queen's University, Kingston, Ontario, Canada.
Haolun TianBiology, Queen's University, Kingston, Ontario, Canada.
Stephen C LougheedBiology, Queen's University, Kingston, Ontario, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Climate change has driven shifts in breeding phenology of many amphibians, causing phenological mismatches ( Methods: In this study, we designed and evaluated the performance of an environmental DNA (eDNA) droplet digital PCR (ddPCR) assay as a non-invasive tool to assess the breeding phenology of a Western Chorus Frog population ( Results: We recorded the first male calling when the focal marsh was still largely frozen. Chorus frog eDNA was detected on April 6 Conclusions: Altogether, our results showed that eDNA ddPCR signals lagged behind male chorusing by a few days; thus, acoustic monitoring is preferable if the desire is to document the onset of male chorusing. However, eDNA may be an effective, non-invasive monitoring tool for amphibians that do not call and may provide a useful complement to automated acoustic recording. We found inhibition patterns were heterogeneous across time and space and we demonstrate that an internal positive control should always be included to assess inhibition for eDNA ddPCR signal interpretations.

Indexed as

DNA, EnvironmentalEndangered SpeciesAnimalsAnuraDNAMalePolymerase Chain ReactionDNADNA, EnvironmentalChorus frogDroplet digital PCREnvironmental DNAInhibitionPhenologyThreatened species

Identifiers

PMID36710869
PMCPMC9879156

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.