Evidence map›Paper›PMID 36709343›Full record

ArticleNature communications2023

Metamorphism in TDP-43 prion-like domain determines chaperone recognition.

Jaime Carrasco, Rosa Antón, Alejandro Valbuena, David Pantoja-Uceda, Mayur Mukhi, Rubén Hervás, Douglas V Laurents, María Gasset, Javier Oroz

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. [Mechanisms of RNA-binding protein phase separation in steroid-associated necrosis of the femoral head].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2026
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  9. A Prion-Like Domain in EBV EBNA1 Promotes Phase Separation and Enables SRRM1 Splicing.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  10. DnaJB1 chaperone inhibits tau aggregation by recognizing its N-terminus.bioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Jaime CarrascoInstituto de Química Física Rocasolano (IQFR), CSIC, E-28006, Madrid, Spain.ORCID 0000-0002-6951-8786
Rosa AntónInstituto de Química Física Rocasolano (IQFR), CSIC, E-28006, Madrid, Spain.
Alejandro ValbuenaCentro de Biología Molecular "Severo Ochoa", Universidad Autónoma de Madrid, Cantoblanco, E-28049, Madrid, Spain.ORCID 0000-0002-6801-640X
David Pantoja-UcedaInstituto de Química Física Rocasolano (IQFR), CSIC, E-28006, Madrid, Spain.ORCID 0000-0003-4390-6972
Mayur MukhiSchool of Biomedical Sciences, University of Hong Kong, Pokfulam, Hong Kong.ORCID 0000-0002-5626-3198
Rubén HervásSchool of Biomedical Sciences, University of Hong Kong, Pokfulam, Hong Kong.
Douglas V LaurentsInstituto de Química Física Rocasolano (IQFR), CSIC, E-28006, Madrid, Spain.ORCID 0000-0002-4187-165X
María GassetInstituto de Química Física Rocasolano (IQFR), CSIC, E-28006, Madrid, Spain.ORCID 0000-0001-6436-4055
Javier OrozInstituto de Química Física Rocasolano (IQFR), CSIC, E-28006, Madrid, Spain. joroz@iqfr.csic.es.ORCID 0000-0003-2687-3013
Instituto de Química Física Blas Cabrera · ESUniversity of Hong Kong · HKCentro de Biología Molecular Severo Ochoa · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RNA binding protein TDP-43 forms cytoplasmic inclusions via its C-terminal prion-like domain in several neurodegenerative diseases. Aberrant TDP-43 aggregation arises upon phase de-mixing and transitions from liquid to solid states, following still unknown structural conversions which are primed by oxidative stress and chaperone inhibition. Despite the well-established protective roles for molecular chaperones against protein aggregation pathologies, knowledge on the determinants of chaperone recognition in disease-related prions is scarce. Here we show that chaperones and co-chaperones primarily recognize the structured elements in TDP-43´s prion-like domain. Significantly, while HSP70 and HSP90 chaperones promote TDP-43 phase separation, co-chaperones from the three classes of the large human HSP40 family (namely DNAJA2, DNAJB1, DNAJB4 and DNAJC7) show strikingly different effects on TDP-43 de-mixing. Dismantling of the second helical element in TDP-43 prion-like domain by methionine sulfoxidation impacts phase separation and amyloid formation, abrogates chaperone recognition and alters phosphorylation by casein kinase-1δ. Our results show that metamorphism in the post-translationally modified TDP-43 prion-like domain encodes determinants that command mechanisms with major relevance in disease.

Indexed as

DNA-Binding ProteinsPrionsHeat-Shock ProteinsHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsHumansMolecular ChaperonesProtein AggregatesDNA-Binding ProteinsDNAJA2 protein, humanDNAJB1 protein, humanDNAJC7 protein, humanHeat-Shock ProteinsHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsMolecular ChaperonesPrionsProtein AggregatesTARDBP protein, human

Identifiers

PMID36709343
PMCPMC9884275
OpenAlexW4318339505

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.