Evidence map›Paper›PMID 36709316›Full record

ArticleNature communications2023

The H2A.Z and NuRD associated protein HMG20A controls early head and heart developmental transcription programs.

Andreas Herchenröther, Stefanie Gossen, Tobias Friedrich, Alexander Reim, Nadine Daus, Felix Diegmüller, Jörg Leers, Hakimeh Moghaddas Sani, Sarah Gerstner, Leah Schwarz and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Andreas HerchenrötherInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany.ORCID 0000-0001-9180-0537
Stefanie Gossen *Department of Biology, Molecular Embryology, Philipps University Marburg, Marburg, Germany.
Tobias Friedrich *Institute for Biochemistry, Justus-Liebig University Giessen, Giessen, Germany.ORCID 0000-0003-4014-8678
Alexander ReimDepartment of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany.
Nadine DausInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany.
Felix DiegmüllerInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany.
Jörg LeersInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany.
Hakimeh Moghaddas SaniSchool of Life and Environmental Sciences, University of Sydney, New South Wales, Australia.ORCID 0000-0003-4718-4786
Sarah GerstnerDepartment of Biology, Molecular Embryology, Philipps University Marburg, Marburg, Germany.
Leah SchwarzDepartment of Biology, Molecular Embryology, Philipps University Marburg, Marburg, Germany.
Inga StellmacherInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany.ORCID 0000-0002-6975-6821
Laura Victoria SzymkowiakInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany.ORCID 0000-0002-9667-2746
Andrea NistGenomics Core Facility, Institute of Molecular Oncology, Universities of Giessen and Marburg Lung Center, Member of the German Center for Lung Research (DZL), Philipps-University Marburg, Marburg, Germany.
Thorsten StieweGenomics Core Facility, Institute of Molecular Oncology, Universities of Giessen and Marburg Lung Center, Member of the German Center for Lung Research (DZL), Philipps-University Marburg, Marburg, Germany.ORCID 0000-0003-0134-7826
Tilman BorggrefeInstitute for Biochemistry, Justus-Liebig University Giessen, Giessen, Germany.ORCID 0000-0003-4325-5452
Matthias MannDepartment of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany.ORCID 0000-0003-1292-4799
Joel P MackaySchool of Life and Environmental Sciences, University of Sydney, New South Wales, Australia.ORCID 0000-0001-7508-8033
Marek BartkuhnBiomedical Informatics and Systems Medicine, Science Unit for Basic and Clinical Medicine, Institute for lung health, Justus-Liebig University Giessen, Giessen, Germany. marek.bartkuhn@gen.bio.uni-giessen.de.ORCID 0000-0001-6872-9082
Annette BorchersDepartment of Biology, Molecular Embryology, Philipps University Marburg, Marburg, Germany. borchers@staff.uni-marburg.de.ORCID 0000-0002-2524-5384
Jie LanInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany. jie.lan@gen.bio.uni-giessen.de.ORCID 0000-0002-4962-8363
Sandra B HakeInstitute for Genetics, Justus-Liebig University Giessen, Giessen, Germany. sandra.hake@gen.bio.uni-giessen.de.ORCID 0000-0003-0029-6588
Justus-Liebig-Universität Gießen · DEPhilipps University of Marburg · DEGerman Center for Lung Research · DEMax Planck Institute of Biochemistry · DEThe University of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specialized chromatin-binding proteins are required for DNA-based processes during development. We recently established PWWP2A as a direct histone variant H2A.Z interactor involved in mitosis and craniofacial development. Here, we identify the H2A.Z/PWWP2A-associated protein HMG20A as part of several chromatin-modifying complexes, including NuRD, and show that it localizes to distinct genomic regulatory regions. Hmg20a depletion causes severe head and heart developmental defects in Xenopus laevis. Our data indicate that craniofacial malformations are caused by defects in neural crest cell (NCC) migration and cartilage formation. These developmental failures are phenocopied in Hmg20a-depleted mESCs, which show inefficient differentiation into NCCs and cardiomyocytes (CM). Consequently, loss of HMG20A, which marks open promoters and enhancers, results in chromatin accessibility changes and a striking deregulation of transcription programs involved in epithelial-mesenchymal transition (EMT) and differentiation processes. Collectively, our findings implicate HMG20A as part of the H2A.Z/PWWP2A/NuRD-axis and reveal it as a key modulator of intricate developmental transcription programs that guide the differentiation of NCCs and CMs.

Indexed as

ChromatinHistonesAnimalsCell DifferentiationEpithelial-Mesenchymal TransitionMiceMouse Embryonic Stem CellsXenopus laevisChromatinHistones

Identifiers

PMID36709316
PMCPMC9884267
OpenAlexW4318344504

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.