Evidence map›Paper›PMID 36707862›Full record

ArticleParasites & vectors2023

Wild deer (Pudu puda) from Chile harbor a novel ecotype of Anaplasma phagocytophilum.

Adriana Santodomingo, Richard Thomas, Sofía Robbiano, Juan E Uribe, Catalina Parragué-Migone, Javier Cabello-Stom, Frank Vera-Otarola, Carola Valencia-Soto, Darío Moreira-Arce, Ezequiel Hidalgo-Hermoso and 1 more

Abstract read
In one paragraph

Article in Parasites & vectors, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. High Exposure to Livestock Pathogens in Southern Pudu (Animals : an open access journal from MDPI · 2024
    Article
  6. Article
  7. Article
  8. Molecular survey and phylogenetic analysis ofFrontiers in veterinary science · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Adriana SantodomingoDepartamento de Ciencia Animal, Facultad de Ciencias Veterinarias, Universidad de Concepción, Chillán, Chile.
Richard ThomasDepartamento de Ciencia Animal, Facultad de Ciencias Veterinarias, Universidad de Concepción, Chillán, Chile.
Sofía RobbianoDepartamento de Ciencia Animal, Facultad de Ciencias Veterinarias, Universidad de Concepción, Chillán, Chile.
Juan E UribeDepartment of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales (MNCN-CSIC), 28006, Madrid, Spain.
Catalina Parragué-MigoneDepartamento de Ciencia Animal, Facultad de Ciencias Veterinarias, Universidad de Concepción, Chillán, Chile.
Javier Cabello-StomCentro de Conservación de la Biodiversidad, Chiloé Silvestre, Nal Bajo, Chiloé, Chile.
Frank Vera-OtarolaFacultad de Ciencias de la Naturaleza, Sede de La Patagonia, Universidad San Sebastián, Puerto Montt, Chile.
Carola Valencia-SotoFacultad de Ciencias de la Naturaleza, Sede de La Patagonia, Universidad San Sebastián, Puerto Montt, Chile.
Darío Moreira-ArceUniversidad de Santiago de Chile (USACH), Santiago, Chile.
Ezequiel Hidalgo-HermosoFundación Buin Zoo, Panamericana Sur Km 32, Buin, Chile.
Sebastián Muñoz-LealDepartamento de Ciencia Animal, Facultad de Ciencias Veterinarias, Universidad de Concepción, Chillán, Chile. sebamunoz@udec.cl.

Funding

Agencia Nacional de Investigación y Desarrollo Beca ANID DOCTORADO NACIONAL 2019-21190078Agencia Nacional de Investigación y Desarrollo Beca ANID DOCTORADO NACIONAL 2020-21200182Fondo Nacional de Desarrollo Científico y Tecnológico 11220177
6 · The paper itself

Abstract

backgroundDeer species play an important role in the enzootic cycles of several Anaplasma species. While in the Northern Hemisphere ticks of genus Ixodes are well recognized vectors of these intracellular bacteria, less is known regarding the biological cycles of Anaplasma spp. in South America.

methodsUsing PCR protocols and Sanger sequencing, we assessed the presence of Anaplasma spp. in blood and ticks collected on a native deer species (Pudu puda) from southern Chile.

resultsBased on phylogenetic analyses of the 16S rRNA, gltA and groEL genes and calculation of average sequence divergence for groEL, our results bring to light a novel genovariant of Anaplasma phagocytophilum (named strain "Patagonia"). The strain represents a novel ecotype within the A. phagocytophilum species complex and was detected in both P. puda and their ticks. Using a larger matrix, denser taxon sampling and outgroup, our maximum-likelihood- and Bayesian-inferred phylogenies for groEL provide an accurate picture of the topology of A. phagocytophilum ecotypes and their evolutionary relationships.

conclusionsThis is the first report of an ecotype of A. phagocytophilum in South America. Our results provide novel insight into the genetic diversity and ecology of this complex of bacterial lineages. Further studies should elucidate the enzootic cycle of A. phagocytophilum strain "Patagonia" and assess its pathogenic potential for pudues, domestic animals and humans in the region.

Indexed as

Anaplasma phagocytophilumDeerIxodesAnaplasmaAnimalsAnimals, WildBayes TheoremChileEcotypeHumansPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16SIxodes stilesiMolecular detectionPhylogeneticsSouthern PuduTick-borne diseasesWildlife

Identifiers

PMID36707862
PMCPMC9883915

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.