ArticleBMC genomics2023
Multiple variation patterns of terpene synthases in 26 maize genomes.
Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed, 19 citations in OpenAlex.
- Article
- Pan-Genome-Wide Analysis and Expression Profiling of the Potato GST Gene Family.Plants (Basel, Switzerland) · 2026Article
- Pan-genomic analysis and abiotic stress expression of eight TPS gene families in Brassica napus.BMC plant biology · 2026Article
- Pan-genome analysis of soybean terpene synthase identifiesFrontiers in plant science · 2026Article
- Pan-genome identification and expression analysis of the ARF gene family in potato.BMC plant biology · 2025Article
- Pan-Genome-Based Characterization of the PYL Transcription Factor Family inPlants (Basel, Switzerland) · 2025Article
- Pan-Genome-Wide Investigation and Expression Analysis ofPlants (Basel, Switzerland) · 2025Article
- Phylogeny and Functional Differentiation of the Terpene Synthase Gene Family in Angiosperms with Emphasis onInternational journal of molecular sciences · 2025Article
- Evolutionary conservation and enhanced basal immunity of the ZmNBS gene family in maize.Frontiers in plant science · 2025Article
- Genome-wide identification and evolution-profiling analysis of tps gene family inFrontiers in plant science · 2025Article
- Analysis of maize PAL pan gene family and expression pattern under lepidopteran insect stress.Frontiers in plant science · 2025Article
- Pangenome Identification and Analysis of Terpene Synthase Gene Family Members inInternational journal of molecular sciences · 2024Article
- Pan-genome analysis and expression verification of the maize ARF gene family.Frontiers in plant science · 2024Article
- Comparative genomic profiling ofFrontiers in plant science · 2024Article
- The terpene synthase gene family in maize - a clarification of existing community nomenclature.BMC genomics · 2023Article
Corrections and comments
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Authors and funding
10 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Terpenoids are important compounds associated with the pest and herbivore resistance mechanisms of plants; consequently, it is essential to identify and explore terpene synthase (TPS) genes in maize. In the present study, we identified 31 TPS genes based on a pan-genome of 26 high-quality maize genomes containing 20 core genes (present in all 26 lines), seven dispensable genes (present in 2 to 23 lines), three near-core genes (present in 24 to 25 lines), and one private gene (present in only 1 line). Evaluation of ka/ks values of TPS in 26 varieties revealed that TPS25 was subjected to positive selection in some varieties. Six ZmTPS had ka/ks values less than 1, indicating that they were subjected to purifying selection. In 26 genomes, significant differences were observed in ZmTPS25 expression between genes affected by structural variation (SV) and those not affected by SV. In some varieties, SV altered the conserved structural domains resulting in a considerable number of atypical genes. The analysis of RNA-seq data of maize Ostrinia furnacalis feeding revealed 10 differentially expressed ZmTPS, 9 of which were core genes. However, many atypical genes for these responsive genes were identified in several genomes. These findings provide a novel resource for functional studies of ZmTPS.
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