Evidence map›Paper›PMID 36705857›Full record

ArticleMolecular diversity2024

Decoding the mechanism of earthworm extract against wounds: an integrated metabolomics and network pharmacology study.

Dong Wang, Zhen Ruan, Ruihui Wang, Li Ma, Saiqing Tang, Xuejing Wang, Axue Ma

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular diversity, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Deciphering the immunomodulatory mechanisms ofFrontiers in cell and developmental biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dong WangMedical Research and Experiment Center, Shaanxi University of Chinese Medicine, Xianyang, China. dwang1987@126.com.ORCID http://orcid.org/0000-0002-6302-7679
Zhen RuanXianyang Central Hospital, Xianyang, China.
Ruihui WangMedical Research and Experiment Center, Shaanxi University of Chinese Medicine, Xianyang, China.
Li MaMedical Research and Experiment Center, Shaanxi University of Chinese Medicine, Xianyang, China.
Saiqing TangSecond Clinical Medical School, Shaanxi University of Chinese Medicine, Xianyang, China.
Xuejing WangMedical Research and Experiment Center, Shaanxi University of Chinese Medicine, Xianyang, China.
Axue MaSecond Clinical Medical School, Shaanxi University of Chinese Medicine, Xianyang, China.

Funding

Key Research and Development Program of Xianyang 2020K02-97Key Research and Development Projects of Shaanxi Province 2021SF-361National Natural Science Foundation of China 82104975Science and Technology Leading Talents of Xianyang L2022CXNLRC008Scientific Research Program funded by Health Commission of Shaanxi Province 2021A007Scientific Research Program Funded by Shaanxi Provincial Education Department 21JS019
6 · The paper itself

Abstract

Earthworms are used to cure wounds in Chinese villages for thousands of years. Recently, scientists realized their extracts could promote wound healing and they have anti-inflammatory, antioxidant, anti-apoptosis, and anti-microbial properties, but its mechanism of promoting wound healing remains unclear. In the presented study, electronic literature databases and LC-MS/MS were used to determine earthworms' ingredients and differential metabolites. Swiss Target Prediction database was used for ingredients' target prediction and wound disease-relevant genes were found from GeneCards, OMIM, and DrugBank databases. Network pharmacology was conducted to demonstrate filtering hub targets, biological functions, and the signaling pathways of earthworms extract against wounds. Molecular docking and metabolism analysis were used to look for core target genes and key bioactive molecules from earthworms. Finally, the investigation shows 5 most important signal pathways, 5 core genes, and 6 bioactive ingredients-related cell-cell adhesion, cell proliferation, and cell migration processes could be affected by earthworms' extract. On 3rd day, the extract could regulate HIF1A and EGFR targets to make the differences of quantities of 4-pyridoxate, tetradecanoic acid, and L-kynurenine. While on 7th day, the regulation refers 6 earthworms' bioactive ingredients, 4 core genes (CTNNB1, EGFR, SRC, and CASP3), and 4 differential metabolites (4-hydoxy-2-quinolinecarboxylic acid, urocanate, deoxyinosine, creatine, and sn-glycerol-3-phosphocholine). on 14th day, 2 core genes (EGFR, SRC) are influenced in the biological processes. Briefly, we found that 6 ingredients from earthworms have most bioactive and 5 core genes play an important role in promoting wound-healing processes. These discovers indicates earthworms could against wound via AGE-RAGE, PI3K-Akt, HIF1A, MAPK, and Axon guidance pathways.

Indexed as

MetabolomicsNetwork PharmacologyOligochaetaWound HealingAnimalsMolecular Docking SimulationSignal TransductionBioinformationEarthwormsMetabolismNetwork pharmacologyWound healing

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.