Evidence map›Paper›PMID 36704337›Full record

ArticleFrontiers in genetics2022

Whole-genome resequencing reveals genetic diversity, differentiation, and selection signatures of yak breeds/populations in Qinghai, China.

Guangzhen Li, Jing Luo, Fuwen Wang, Donghui Xu, Zulfiqar Ahmed, Shengmei Chen, Ruizhe Li, Zhijie Ma

Open access · goldAbstract read
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Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Guangzhen LiAcademy of Animal Science and Veterinary Medicine, Qinghai University, Xining, China.
Jing LuoAcademy of Animal Science and Veterinary Medicine, Qinghai University, Xining, China.
Fuwen WangCollege of Animal Science and Technology, Northwest A&F University, Xianyang, China.
Donghui XuAcademy of Animal Science and Veterinary Medicine, Qinghai University, Xining, China.
Zulfiqar AhmedFaculty of Veterinary and Animal Sciences, University of Poonch Rawalakot, Rawalakot, Pakistan.
Shengmei ChenAcademy of Animal Science and Veterinary Medicine, Qinghai University, Xining, China.
Ruizhe LiAcademy of Animal Science and Veterinary Medicine, Qinghai University, Xining, China.
Zhijie MaAcademy of Animal Science and Veterinary Medicine, Qinghai University, Xining, China.
Ministry of Agriculture and Rural Affairs · CNQinghai University · CNNorthwest A&F University · CNUniversity of Veterinary and Animal Sciences · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Qinghai Province of China is located in the northeast region of the Qinghai-Tibetan Plateau (QTP) and carries abundant yak genetic resources. Previous investigations of archaeological records, mitochondrial DNA, and Y chromosomal markers have suggested that Qinghai was the major center of yak domestication. In the present study, we examined the genomic diversity, differentiation, and selection signatures of 113 Qinghai yak, including 42 newly sequenced Qinghai yak and 71 publicly available individuals, from nine yak breeds/populations (wild, Datong, Huanhu, Xueduo, Yushu, Qilian, Geermu, Tongde, and Huzhu white) using high-depth whole-genome resequencing data. We observed that most of Qinghai yak breeds/populations have abundant genomic diversity based on four genomic parameters (nucleotide diversity, inbreeding coefficients, linkage disequilibrium decay, and runs of homozygosity). Population genetic structure analysis showed that Qinghai yak have two lineages with two ancestral origins and that nine yak breeds/populations are clustered into three distinct groups of wild yak, Geermu yak, and seven other domestic yak breeds/populations.

Indexed as

Bos grunniensgenomic diversitypopulation structureselection signaturewhole-genome resequencing

Identifiers

PMID36704337
PMCPMC9871260
OpenAlexW4315489781

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.