Evidence map›Paper›PMID 36703336›Full record

ArticleCommunications chemistry2020

Control over the fibrillization yield by varying the oligomeric nucleation propensities of self-assembling peptides.

Chun Yin Jerry Lau, Federico Fontana, Laurens D B Mandemaker, Dennie Wezendonk, Benjamin Vermeer, Alexandre M J J Bonvin, Renko de Vries, Heyang Zhang, Katrien Remaut, Joep van den Dikkenberg and 8 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Communications chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Modulating Peptide Self-Assembly via Triblock Chiral Patterning.Chemistry (Weinheim an der Bergstrasse, Germany) · 2025
    Article
  2. Review
  3. Assessment of the MARTINI 3 Performance for Short Peptide Self-Assembly.Journal of chemical theory and computation · 2024
    Article
  4. The Martini Model in Materials Science.Advanced materials (Deerfield Beach, Fla.) · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 4 countries.

Chun Yin Jerry LauUtrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutics, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands.ORCID http://orcid.org/0000-0002-2079-208X
Federico FontanaIRCCS Casa Sollievo della Sofferenza, Opera di San Pio da Pietralcina, Viale Capuccini 1, 71013, San Giovanni Rotondo, Italy.
Laurens D B MandemakerInorganic Chemistry and Catalysis Group, Debye Institute for Nanomaterials Science, Department of Chemistry, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands.
Dennie WezendonkInorganic Chemistry and Catalysis Group, Debye Institute for Nanomaterials Science, Department of Chemistry, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands.
Benjamin VermeerNMR Spectroscopy, Bijvoet Centre for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.
Alexandre M J J BonvinNMR Spectroscopy, Bijvoet Centre for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.
Renko de VriesLaboratory of Physical Chemistry and Colloid Science, Wageningen University, Dreijenplein 6, 6703 HB, Wageningen, The Netherlands.
Heyang ZhangGhent Research Group on Nanomedicines, Laboratory of General Biochemistry and Physical Pharmacy, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium.
Katrien RemautGhent Research Group on Nanomedicines, Laboratory of General Biochemistry and Physical Pharmacy, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium.
Joep van den DikkenbergUtrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutics, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands.
João Medeiros-SilvaNMR Spectroscopy, Bijvoet Centre for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.ORCID http://orcid.org/0000-0003-3532-4390
Alia HassanBruker BioSpin AG, Industriestrasse 26, 8117, Fällanden, Switzerland.
Barbara PerroneBruker BioSpin AG, Industriestrasse 26, 8117, Fällanden, Switzerland.
Rainer KuemmerleBruker BioSpin AG, Industriestrasse 26, 8117, Fällanden, Switzerland.
Fabrizio GelainIRCCS Casa Sollievo della Sofferenza, Opera di San Pio da Pietralcina, Viale Capuccini 1, 71013, San Giovanni Rotondo, Italy.ORCID http://orcid.org/0000-0002-2624-5853
Wim E HenninkUtrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutics, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands.
Markus WeingarthNMR Spectroscopy, Bijvoet Centre for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands. m.h.weingarth@uu.nl.ORCID http://orcid.org/0000-0003-0831-8673
Enrico MastrobattistaUtrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutics, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands. e.mastrobattista@uu.nl.ORCID http://orcid.org/0000-0002-6745-2015
Utrecht University · NLBruker (Switzerland) · CHCasa Sollievo della Sofferenza · ITGhent University · BEWageningen University & Research · NL

Funding

EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 676137
6 · The paper itself

Abstract

Self-assembling peptides are an exemplary class of supramolecular biomaterials of broad biomedical utility. Mechanistic studies on the peptide self-assembly demonstrated the importance of the oligomeric intermediates towards the properties of the supramolecular biomaterials being formed. In this study, we demonstrate how the overall yield of the supramolecular assemblies are moderated through subtle molecular changes in the peptide monomers. This strategy is exemplified with a set of surfactant-like peptides (SLPs) with different β-sheet propensities and charged residues flanking the aggregation domains. By integrating different techniques, we show that these molecular changes can alter both the nucleation propensity of the oligomeric intermediates and the thermodynamic stability of the fibril structures. We demonstrate that the amount of assembled nanofibers are critically defined by the oligomeric nucleation propensities. Our findings offer guidance on designing self-assembling peptides for different biomedical applications, as well as insights into the role of protein gatekeeper sequences in preventing amyloidosis.

Identifiers

PMID36703336
PMCPMC9814929
OpenAlexW3098746564

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.