Evidence map›Paper›PMID 36703004›Full record

ArticleBehavior research methods2024

Easy, bias-free Bayesian hierarchical modeling of the psychometric function using the Palamedes Toolbox.

Nicolaas Prins

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Behavior research methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Nicolaas PrinsDepartment of Psychology, University of Mississippi, Oxford, MS, 38677, USA. nprins@olemiss.edu.ORCID 0000-0001-8074-332X
University of Mississippi · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A hierarchical Bayesian method is proposed that can be used to fit multiple psychometric functions (PFs) simultaneously across conditions and subjects. The method incorporates the generalized linear model and allows easy reparameterization of the parameters of the PFs, for example, to constrain parameter values across conditions or to code for experimental effects (e.g., main effects and interactions in a factorial design). Simulations indicate that fitting PFs for multiple conditions and observers simultaneously using the hierarchical structure effectively eliminates bias and improves precision in parameter estimates relative to fitting PFs individually in each condition. The method is further validated by analyzing human psychophysical data obtained in an experiment investigating the effect of attention on correspondence matching in an ambiguous long-range motion display. The method converges successfully, even for experiments that use a low number of trials per subject, without the need for fine-tuning by the user and while using the default essentially uninformative priors. The latter may make the method more acceptable to those critical of applying informative priors. The method is implemented in the freely downloadable Palamedes Toolbox, which also includes routines that graphically display the fitted psychometric functions alongside the data, and derive and display posterior distributions of parameters, summary statistics, and diagnostic measures. Overall, these features make hierarchical Bayesian modeling of PFs easily available to researchers who wish to use Bayesian statistics but lack the expertise to implement these methods themselves.

Indexed as

Research DesignBayes TheoremBiasHumansLinear ModelsPsychometricsBayesian hierarchical modelingPerceptual measurementPsychometric functionPsychophysics

Identifiers

PMID36703004
OpenAlexW4318161811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.