Evidence map›Paper›PMID 36699705›Full record

ReviewFrontiers in molecular biosciences2022

Twisting and swiveling domain motions in Cas9 to recognize target DNA duplexes, make double-strand breaks, and release cleaved duplexes.

Jimin Wang, Pablo R Arantes, Mohd Ahsan, Souvik Sinha, Gregory W Kyro, Federica Maschietto, Brandon Allen, Erin Skeens, George P Lisi, Victor S Batista and 1 more

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in molecular biosciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jimin WangDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, United States.
Pablo R ArantesDepartment of Bioengineering and Department of Chemistry, University of California, Riverside, Riverside, CA, United States.
Mohd AhsanDepartment of Bioengineering and Department of Chemistry, University of California, Riverside, Riverside, CA, United States.
Souvik SinhaDepartment of Bioengineering and Department of Chemistry, University of California, Riverside, Riverside, CA, United States.
Gregory W KyroDepartment of Chemistry, Yale University, New Haven, CT, United States.
Federica MaschiettoDepartment of Chemistry, Yale University, New Haven, CT, United States.
Brandon AllenDepartment of Chemistry, Yale University, New Haven, CT, United States.
Erin SkeensDepartment of Molecular and Cell Biology and Biochemistry, Brown University, Providence, RI, United States.
George P LisiDepartment of Molecular and Cell Biology and Biochemistry, Brown University, Providence, RI, United States.
Victor S BatistaDepartment of Chemistry, Yale University, New Haven, CT, United States.
Giulia PalermoDepartment of Bioengineering and Department of Chemistry, University of California, Riverside, Riverside, CA, United States.
Yale University · USUniversity of California, Riverside · USBrown University · US

Funding

Predoctoral Program in BiophysicsT32GM149438 · NIGMS · YALE UNIVERSITY · PI Yong Xiong, Elsa Chui Ying Yan · 2023 to 2026
$2.6M
Investigating the metal-dependent function, allostery and inhibition of CRISPR-Cas9R01GM141329 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI PALERMO, GIULIA · 2021 to 2025
$1.7M
Studies of Allostery between Multi-domain Proteins and Nucleic Acid ComplexesR01GM136815 · NIGMS · YALE UNIVERSITY · PI BATISTA, VICTOR S · 2021 to 2024
$1.4M
NIGMS NIH HHS R01 GM136815NIGMS NIH HHS R01 GM141329NIGMS NIH HHS T32 GM149438
6 · The paper itself

Abstract

The CRISPR-associated protein 9 (Cas9) has been engineered as a precise gene editing tool to make double-strand breaks. CRISPR-associated protein 9 binds the folded guide RNA (gRNA) that serves as a binding scaffold to guide it to the target DNA duplex

Indexed as

active site transformationallosterycleavage-ligation equilibriuminactive-to-active transitionopen-closing motionsswiveling motionstwisting motions

Identifiers

PMID36699705
PMCPMC9868570
OpenAlexW4313894924

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.