Evidence map›Paper›PMID 36698022›Full record

ArticleCommunications chemistry2023

Formaldehyde reacts with N-terminal proline residues to give bicyclic aminals.

Tobias John, Elisabete Pires, Svenja S Hester, Eidarus Salah, Richard J Hopkinson, Christopher J Schofield

Open access · goldAbstract read
In one paragraph

Article in Communications chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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  3. Effect of HScientific reports · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Tobias JohnChemistry Research Laboratory, 12 Mansfield Road, Oxford, OX1 3TA, UK.
Elisabete PiresChemistry Research Laboratory, 12 Mansfield Road, Oxford, OX1 3TA, UK.
Svenja S HesterNuffield Department of Medicine, Target Discovery Institute, University of Oxford, Oxford, UK.
Eidarus SalahChemistry Research Laboratory, 12 Mansfield Road, Oxford, OX1 3TA, UK.
Richard J HopkinsonLeicester Institute for Structural and Chemical Biology and School of Chemistry, University of Leicester, Henry Wellcome Building, Lancaster Road, Leicester, LE1 7RH, UK. richard.hopkinson@leicester.ac.uk.ORCID http://orcid.org/0000-0001-7610-8163
Christopher J SchofieldChemistry Research Laboratory, 12 Mansfield Road, Oxford, OX1 3TA, UK. christopher.schofield@chem.ox.ac.uk.ORCID http://orcid.org/0000-0002-0290-6565
Oxford Research Group · GBMansfield University · USUniversity of Leicester · GBUniversity of Oxford · GB

Funding

Cancer Research UK 28285Wellcome Trust
6 · The paper itself

Abstract

Formaldehyde (HCHO) is a potent electrophile that is toxic above threshold levels, but which is also produced in the nuclei of eukaryotic cells by demethylases. We report studies with the four canonical human histones revealing that histone H2B reacts with HCHO, including as generated by a histone demethylase, to give a stable product. NMR studies show that HCHO reacts with the N-terminal proline and associated amide of H2B to give a 5,5-bicyclic aminal that is relatively stable to competition with HCHO scavengers. While the roles of histone modification by this reaction require further investigation, we demonstrated the potential of N-terminal aminal formation to modulate protein function by conducting biochemical and cellular studies on the effects of HCHO on catalysis by 4-oxalocrotonate tautomerase, which employs a nucleophilic N-terminal proline. The results suggest that reactions of N-terminal residues with HCHO and other aldehydes have potential to alter protein function.

Identifiers

PMID36698022
PMCPMC9839752
OpenAlexW4315866386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.