Evidence map›Paper›PMID 36696438›Full record

ArticlePLoS neglected tropical diseases2023

Malian children infected with Plasmodium ovale and Plasmodium falciparum display very similar gene expression profiles.

Kieran Tebben, Salif Yirampo, Drissa Coulibaly, Abdoulaye K Koné, Matthew B Laurens, Emily M Stucke, Ahmadou Dembélé, Youssouf Tolo, Karim Traoré, Amadou Niangaly and 9 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Population genomics ofbioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Evaluation of the Performance of Rapid Diagnostic Tests for Malaria Diagnosis and Mapping of DifferentInternational journal of environmental research and public health · 2024
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 2 countries.

Kieran TebbenInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.ORCID 0000-0001-8866-7667
Salif YirampoMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Drissa CoulibalyMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Abdoulaye K KonéMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Matthew B LaurensMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Emily M StuckeMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Ahmadou DembéléMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Youssouf ToloMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Karim TraoréMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Amadou NiangalyMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Andrea A BerryMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Bourema KouribaMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Christopher V PloweMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Ogobara K DoumboMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Kirsten E LykeMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Shannon Takala-HarrisonMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Mahamadou A TheraMalaria Research and Training Center, University of Sciences, Techniques and Technologies, Bamako, Mali.
Mark A TravassosMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
David SerreInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.ORCID 0000-0002-2446-9095
Université des Sciences, des Techniques et des Technologies de Bamako · MLUniversity of Maryland, Baltimore · US

Funding

EXPAND PARTICIPATION BY MINORITIES IN BIOMEDICAL SCIENCER25GM055036 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SUMMERS, MICHAEL FINLEY · 1996 to 2021
$16.9M
FELLOWSHIP TRAINING PROGRAM IN VACCINOLOGYT32AI007524 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI Marcelo B. Sztein · 1997 to 2026
$6.4M
Signaling Pathways in Innate ImmunityT32AI095190 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI Stefanie N. Vogel · 2012 to 2026
$4.7M
Genetic diversity and protective immunity to malaria infection and diseaseU01AI065683 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI PLOWE, CHRISTOPHER V. · 2010 to 2014
$3.0M
MALARIA RESEARCH TRAINING IN MALID43TW001589 · FIC · UNIVERSITY OF MARYLAND BALTIMORE · PI PLOWE, CHRISTOPHER V. · 2000 to 2015
$2.8M
Variant surface antigens in cerebral malaria pathogenesisR01HL130750 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI FISHER, STEVEN A., PLOWE, CHRISTOPHER V. · 2015 to 2018
$2.1M
Malaria variant surface antigen expression and vulnerability to disease in Malian children with Hemoglobin C traitR01HL146377 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI TRAVASSOS, MARK A · 2019 to 2023
$1.9M
Host vulnerability and parasite genetics in the development of cerebral malariaR01AI099628 · NIAID · UNIV OF SCIENCES, TECH & TECH OF BAMAKO · PI THERA, MAHAMADOU ALI · 2014 to 2018
$625k
Host and Parasite Transcriptional Changes Associated with Immunity to Clinical Malaria in Malian ChildrenR21AI146853 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI SERRE, DAVID, TRAVASSOS, MARK A · 2019 to 2020
$425k
FIC NIH HHS D43 TW001589NHLBI NIH HHS R01 HL130750NHLBI NIH HHS R01 HL146377NIAID NIH HHS R01 AI099628NIAID NIH HHS R21 AI146853NIAID NIH HHS T32 AI007524NIAID NIH HHS T32 AI095190NIAID NIH HHS U01 AI065683NIGMS NIH HHS R25 GM055036
6 · The paper itself

Abstract

Plasmodium parasites caused 241 million cases of malaria and over 600,000 deaths in 2020. Both P. falciparum and P. ovale are endemic to Mali and cause clinical malaria, with P. falciparum infections typically being more severe. Here, we sequenced RNA from nine pediatric blood samples collected during infections with either P. falciparum or P. ovale, and characterized the host and parasite gene expression profiles. We found that human gene expression varies more between individuals than according to the parasite species causing the infection, while parasite gene expression profiles cluster by species. Additionally, we characterized DNA polymorphisms of the parasites directly from the RNA-seq reads and found comparable levels of genetic diversity in both species, despite dramatic differences in prevalence. Our results provide unique insights into host-pathogen interactions during malaria infections and their variations according to the infecting Plasmodium species, which will be critical to develop better elimination strategies against all human Plasmodium parasites.

Indexed as

MalariaMalaria, FalciparumTranscriptomeChildHumansPlasmodium falciparumPlasmodium ovale

Identifiers

PMID36696438
PMCPMC9901758
OpenAlexW4318025970

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.