Evidence map›Paper›PMID 36693864›Full record

ArticleScientific reports2023

Maternal control of triploid seed development by the TRANSPARENT TESTA 8 (TT8) transcription factor in Arabidopsis thaliana.

Cecilia Zumajo-Cardona, Manuel Aguirre, Rosa Castillo-Bravo, Chiara Mizzotti, Maurizio Di Marzo, Camilla Banfi, Marta A Mendes, Charles Spillane, Lucia Colombo, Ignacio Ezquer

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Review
  6. Varied chromosome distribution behaviours during meiosis in triploid Chinese chives contribute to the formation of viable pollen.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2024
    Article
  7. Parental dialectic: Epigenetic conversations in endosperm.Current opinion in plant biology · 2024
    Review
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  9. Review
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Cecilia Zumajo-CardonaDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy.
Manuel AguirreDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy.
Rosa Castillo-BravoGenetics and Biotechnology Laboratory, Plant and AgriBioscience Research Centre (PABC), Ryan Institute, National University of Ireland Galway, University Road, Galway, H91 REW4, Ireland.
Chiara MizzottiDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy.
Maurizio Di MarzoDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy.
Camilla BanfiDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy.
Marta A MendesDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy.
Charles SpillaneGenetics and Biotechnology Laboratory, Plant and AgriBioscience Research Centre (PABC), Ryan Institute, National University of Ireland Galway, University Road, Galway, H91 REW4, Ireland.
Lucia ColomboDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy.
Ignacio EzquerDipartimento Di BioScienze, Università Degli Studi Di Milano, Via Celoria 26, 20133, Milano, Italy. juan.ezquer@unimi.it.
University of Milan · ITOllscoil na Gaillimhe – University of Galway · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The balance between parental genome dosage is critical to offspring development in both animals and plants. In some angiosperm species, despite the imbalance between maternally and paternally inherited chromosome sets, crosses between parental lines of different ploidy may result in viable offspring. However, many plant species, like Arabidopsis thaliana, present a post-zygotic reproductive barrier, known as triploid block which results in the inability of crosses between individuals of different ploidy to generate viable seeds but also, in defective development of the seed. Several paternal regulators have been proposed as active players in establishing the triploid block. Maternal regulators known to be involved in this process are some flavonoid biosynthetic (FB) genes, expressed in the innermost layer of the seed coat. Here we explore the role of selected flavonoid pathway genes in triploid block, including TRANSPARENT TESTA 4 (TT4), TRANSPARENT TESTA 7 (TT7), SEEDSTICK (STK), TRANSPARENT TESTA 16 (TT16), TT8 and TRANSPARENT TESTA 13 (TT13). This approach allowed us to detect that TT8, a bHLH transcription factor, member of this FB pathway is required for the paternal genome dosage, as loss of function tt8, leads to complete rescue of the triploid block to seed development.

Indexed as

ArabidopsisArabidopsis ProteinsFlavonoidsGene Expression Regulation, PlantMADS Domain ProteinsMutationSeedsTranscription FactorsTriploidyArabidopsis ProteinsFlavonoidsMADS Domain ProteinsSEEDSTICK protein, ArabidopsisTranscription Factors

Identifiers

PMID36693864
PMCPMC9873634
OpenAlexW4317831327

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.