Evidence map›Paper›PMID 36692656›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2023

Molecular characterization of eliminated chromosomes in Hessian fly (Mayetiola destructor (Say)).

Yan M Crane, Charles F Crane, Sue E Cambron, Lucy J Springmeyer, Brandon J Schemerhorn

Open access · hybridAbstract read
In one paragraph

Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yan M CraneUSDA Crop Production and Pest Control Research Unit, West Lafayette, IN, 47907, USA.ORCID 0000-0002-5808-4898
Charles F CraneUSDA Crop Production and Pest Control Research Unit, West Lafayette, IN, 47907, USA.ORCID 0000-0002-7606-185X
Sue E CambronUSDA Crop Production and Pest Control Research Unit, West Lafayette, IN, 47907, USA.
Lucy J SpringmeyerUSDA Crop Production and Pest Control Research Unit, West Lafayette, IN, 47907, USA.
Brandon J SchemerhornUSDA Crop Production and Pest Control Research Unit, West Lafayette, IN, 47907, USA. brandi.schemerhorn@usda.gov.ORCID 0000-0003-0247-478X
Agricultural Research Service · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Like other cecidomyiid Diptera, Hessian fly has stable S chromosomes and dispensable E chromosomes that are retained only in the germ line. Amplified fragment length polymorphisms (AFLP), suppressive subtractive hybridization (SSH), fluorescent in-situ hybridization (FISH), and sequencing were used to investigate similarities and differences between S and E chromosomes. More than 99.9% of AFLP bands were identical between separated ovary and somatic tissue, but one band was unique to ovary and resembled Worf, a non-LTR retrotransposon. Arrayed clones, derived by SSH of somatic from ovarian DNA, showed no clones that were unique to ovary. FISH with BAC clones revealed a diagnostic banding pattern of BAC positions on both autosomes and both sex chromosomes, and each E chromosome shared a pattern with one of the S chromosomes. Sequencing analysis showed that E chromosomes are nearly identical to S chromosomes, since no sequence could be confirmed to belong only to E chromosomes. There were a few questionably E-specific sequences that are candidates for further investigation. Thus, the E chromosomes appear to be derived from S chromosomes by the acquisition or conversion of sequences that produce the negatively heteropycnotic region around the centromere.

Indexed as

DipteraAmplified Fragment Length Polymorphism AnalysisAnimalsBase SequenceDNAFemaleSex ChromosomesDNAchromosome eliminationDNA sequencinggermlineHessian flysupernumerary chromosome

Identifiers

PMID36692656
PMCPMC9873768
OpenAlexW4317830059

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.