Evidence map›Paper›PMID 36692308›Full record

ArticleInfection and immunity2023

Butyrate Differentiates Permissiveness to Clostridioides difficile Infection and Influences Growth of Diverse C. difficile Isolates.

Daniel A Pensinger, Andrea T Fisher, Horia A Dobrila, William Van Treuren, Jackson O Gardner, Steven K Higginbottom, Matthew M Carter, Benjamin Schumann, Carolyn R Bertozzi, Victoria Anikst and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Infection and immunity, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 60 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. Review
  5. Review
  6. [Butyrate alleviatesNan fang yi ke da xue xue bao = Journal of Southern Medical University · 2026
    Article
  7. Article
  8. Review
  9. Acidification-dependent suppression ofInfection and immunity · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Acidification-dependent suppression ofbioRxiv : the preprint server for biology · 2026
    Article
  16. Gut microbes · 2025
    Article
  17. Gut Microbiota Modulation in Asthma-An In Vitro Study.Pharmaceuticals (Basel, Switzerland) · 2025
    Article
  18. Article
  19. The emerging view on the roles of butyrate inInfection and immunity · 2025
    Review
  20. Unravelling three-way interactions betweenJournal of medical microbiology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Daniel A PensingerDepartment of Medicine, Division of Gastroenterology and Hepatology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, USA.
Andrea T FisherDepartment of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.
Horia A DobrilaDepartment of Medicine, Division of Gastroenterology and Hepatology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, USA.
William Van TreurenDepartment of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.
Jackson O GardnerDepartment of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.
Steven K HigginbottomDepartment of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.
Matthew M CarterDepartment of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.
Benjamin SchumannDepartment of Chemistry, Stanford University, Stanford, California, USA.
Carolyn R BertozziDepartment of Chemistry, Stanford University, Stanford, California, USA.
Victoria AnikstDepartment of Pathology, Stanford University School of Medicine, Stanford, California, USA.
Cody MartinMicrobiology Doctoral Training Program, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Elizabeth V RobilottiDepartment of Medicine, Division of Infectious Disease, Stanford University School of Medicine, Stanford, California, USA.
Jo May ChowAbbott, Nutrition Division, Columbus, Ohio, USA.
Rachael H BuckAbbott, Nutrition Division, Columbus, Ohio, USA.
Lucy S TompkinsDepartment of Medicine, Division of Infectious Disease, Stanford University School of Medicine, Stanford, California, USA.
Justin L SonnenburgDepartment of Microbiology & Immunology, Stanford University School of Medicine, Stanford, California, USA.ORCID 0000-0003-2299-6817
Andrew J HryckowianDepartment of Medicine, Division of Gastroenterology and Hepatology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, USA.ORCID 0000-0002-8956-6259
Stanford University · USUniversity of Wisconsin–Madison · USAbbott (United States) · USChan Zuckerberg Biohub San Francisco · USHoward Hughes Medical Institute · US

Funding

MOLECULAR BASIS OF HOST-PARASITE INTERACTIONT32AI007328 · NIAID · STANFORD UNIVERSITY · PI JUSTIN L SONNENBURG · 1987 to 2026
$11.9M
Impact of Diet on Intestinal Microbiota-Host DynamicsR01DK085025 · NIDDK · STANFORD UNIVERSITY · PI JUSTIN L SONNENBURG · 2010 to 2026
$6.4M
Investigating the Surface GlycoproteomeR01CA200423 · NCI · STANFORD UNIVERSITY · PI Carolyn Bertozzi · 2015 to 2026
$3.8M
Howard Hughes Medical InstituteNCI NIH HHS R01 CA200423NIAID NIH HHS T32 AI007328NIDDK NIH HHS R01 DK085025
6 · The paper itself

Abstract

A disrupted "dysbiotic" gut microbiome engenders susceptibility to the diarrheal pathogen Clostridioides difficile by impacting the metabolic milieu of the gut. Diet, in particular the microbiota-accessible carbohydrates (MACs) found in dietary fiber, is one of the most powerful ways to affect the composition and metabolic output of the gut microbiome. As such, diet is a powerful tool for understanding the biology of C. difficile and for developing alternative approaches for coping with this pathogen. One prominent class of metabolites produced by the gut microbiome is short-chain fatty acids (SCFAs), the major metabolic end products of MAC metabolism. SCFAs are known to decrease the fitness of C. difficile

Indexed as

Clostridioides difficileClostridium InfectionsAnimalsAnti-Bacterial AgentsButyratesFatty Acids, VolatileHumansMicePermissivenessAnti-Bacterial AgentsButyratesFatty Acids, Volatilebacterial pathogenesismicrobial metabolitesmicrobiomemicrobiota

Identifiers

PMID36692308
PMCPMC9933713
OpenAlexW4317870341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.