Evidence map›Paper›PMID 36691616›Full record

ArticleiScience2023

A wide foodomics approach coupled with metagenomics elucidates the environmental signature of potatoes.

Anastasia Boutsika, Michail Michailidis, Maria Ganopoulou, Athanasios Dalakouras, Christina Skodra, Aliki Xanthopoulou, George Stamatakis, Martina Samiotaki, Georgia Tanou, Theodoros Moysiadis and 6 more

Abstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Anastasia BoutsikaInstitute of Plant Breeding and Genetic Resources, ELGO-DIMITRA, 570001 Thessaloniki-Thermi, Greece.
Michail MichailidisJoint Laboratory of Horticulture, ELGO-DIMITRA, 57001 Thessaloniki-Thermi, 21 Greece.
Maria GanopoulouSchool of Informatics, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
Athanasios DalakourasInstitute of Plant Breeding and Genetic Resources, ELGO-DIMITRA, 570001 Thessaloniki-Thermi, Greece.
Christina SkodraLaboratory of Pomology, Department of Horticulture, Aristotle University of Thessaloniki, 57001 Thessaloniki-Thermi, Greece.
Aliki XanthopoulouInstitute of Plant Breeding and Genetic Resources, ELGO-DIMITRA, 570001 Thessaloniki-Thermi, Greece.
George StamatakisInstitute for Bioinnovation, Biomedical Sciences Research Center "Alexander Fleming", 16672 Vari, Greece.
Martina SamiotakiInstitute for Bioinnovation, Biomedical Sciences Research Center "Alexander Fleming", 16672 Vari, Greece.
Georgia TanouJoint Laboratory of Horticulture, ELGO-DIMITRA, 57001 Thessaloniki-Thermi, 21 Greece.
Theodoros MoysiadisInstitute of Plant Breeding and Genetic Resources, ELGO-DIMITRA, 570001 Thessaloniki-Thermi, Greece.
Lefteris AngelisSchool of Informatics, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
Christos BazakosInstitute of Plant Breeding and Genetic Resources, ELGO-DIMITRA, 570001 Thessaloniki-Thermi, Greece.
Athanassios MolassiotisLaboratory of Pomology, Department of Horticulture, Aristotle University of Thessaloniki, 57001 Thessaloniki-Thermi, Greece.
Irini Nianiou-ObeidatLaboratory of Genetics and Plant Breeding, School of Agriculture, Aristotle University, 54124 Thessaloniki, Greece.
Ifigeneia MellidouInstitute of Plant Breeding and Genetic Resources, ELGO-DIMITRA, 570001 Thessaloniki-Thermi, Greece.
Ioannis GanopoulosInstitute of Plant Breeding and Genetic Resources, ELGO-DIMITRA, 570001 Thessaloniki-Thermi, Greece.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The term "terroir" has been widely employed to link differential geographic phenotypes with sensorial signatures of agricultural food products, influenced by agricultural practices, soil type, and climate. Nowadays, the geographical indications labeling has been developed to safeguard the quality of plant-derived food that is linked to a certain terroir and is generally considered as an indication of superior organoleptic properties. As the dynamics of agroecosystems are highly intricate, consisting of tangled networks of interactions between plants, microorganisms, and the surrounding environment, the recognition of the key molecular components of terroir fingerprinting remains a great challenge to protect both the origin and the safety of food commodities. Furthermore, the contribution of microbiome as a potential driver of the terroir signature has been underestimated. Herein, we present a first comprehensive view of the multi-omic landscape related to transcriptome, proteome, epigenome, and metagenome of the popular Protected Geographical Indication potatoes of Naxos.

Indexed as

Agricultural plant productsGenomicsPlant biogeography

Identifiers

PMID36691616
PMCPMC9860355

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.