Evidence map›Paper›PMID 36690623›Full record

ArticleNature communications2023

Mechanisms and function of de novo DNA methylation in placental development reveals an essential role for DNMT3B.

Simon Andrews, Christel Krueger, Maravillas Mellado-Lopez, Myriam Hemberger, Wendy Dean, Vicente Perez-Garcia, Courtney W Hanna

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 95 citations in OpenAlex.

  1. CHD8-Dependent Chromatin Licensing Sustains Trophoblast Stem Cell Transcriptional Programs.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Simon AndrewsBioinformatics Programme, Babraham Institute, Cambridge, UK.ORCID 0000-0002-5006-3507
Christel KruegerBioinformatics Programme, Babraham Institute, Cambridge, UK.ORCID 0000-0001-5601-598X
Maravillas Mellado-LopezCentro de Investigación Príncipe Felipe, Valencia, Spain.
Myriam HembergerDepartment of Biochemistry and Molecular Biology, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada.ORCID 0000-0003-3332-6958
Wendy DeanAlberta Children's Hospital Research Institute, University of Calgary, Calgary, AB, Canada.ORCID 0000-0001-9441-5044
Vicente Perez-GarciaCentro de Investigación Príncipe Felipe, Valencia, Spain.
Courtney W HannaEpigenetics Programme, Babraham Institute, Cambridge, UK. cwh36@cam.ac.uk.ORCID 0000-0002-4063-5575
Babraham Institute · GBCentro de Investigacion Principe Felipe · ESUniversity of Calgary · CA

Funding

Wellcome TrustWellcome Trust 222582/Z/21/Z
6 · The paper itself

Abstract

DNA methylation is a repressive epigenetic modification that is essential for development, exemplified by the embryonic and perinatal lethality observed in mice lacking de novo DNA methyltransferases (DNMTs). Here we characterise the role for DNMT3A, 3B and 3L in gene regulation and development of the mouse placenta. We find that each DNMT establishes unique aspects of the placental methylome through targeting to distinct chromatin features. Loss of Dnmt3b results in de-repression of germline genes in trophoblast lineages and impaired formation of the maternal-foetal interface in the placental labyrinth. Using Sox2-Cre to delete Dnmt3b in the embryo, leaving expression intact in placental cells, the placental phenotype was rescued and, consequently, the embryonic lethality, as Dnmt3b null embryos could now survive to birth. We conclude that de novo DNA methylation by DNMT3B during embryogenesis is principally required to regulate placental development and function, which in turn is critical for embryo survival.

Indexed as

DNA MethylationDNA Methyltransferase 3AAnimalsDNA (Cytosine-5-)-MethyltransferasesEpigenesis, GeneticFemaleMicePlacentaPlacentationPregnancyDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3A

Identifiers

PMID36690623
PMCPMC9870994
OpenAlexW4317746823

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.