Evidence map›Paper›PMID 36689866›Full record

ArticleEnvironment international2023

Placental transcriptomic signatures of prenatal exposure to Hydroxy-Polycyclic aromatic hydrocarbons.

Alison G Paquette, Samantha Lapehn, Sophie Freije, James MacDonald, Theo Bammler, Drew B Day, Christine T Loftus, Kurunthachalam Kannan, W Alex Mason, Nicole R Bush and 4 more

Open access · goldAbstract read
In one paragraph

Article in Environment international, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Current approaches and advances in placental toxicology.Trends in endocrinology and metabolism: TEM · 2026
    Review
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  15. Transcriptomic comparison of in vitro models of the human placenta.bioRxiv : the preprint server for biology · 2024
    Article
  16. Associations Between Prenatal Vitamin D and Placental Gene Expression.bioRxiv : the preprint server for biology · 2024
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Alison G PaquetteSeattle Children's Research Institute, Seattle, WA, USA; University of Washington, Seattle, WA, USA. Electronic address: Alison.Paquette@seattlechildrens.org.
Samantha LapehnSeattle Children's Research Institute, Seattle, WA, USA.
Sophie FreijeUniversity of Washington, Seattle, WA, USA.
James MacDonaldUniversity of Washington, Seattle, WA, USA.
Theo BammlerUniversity of Washington, Seattle, WA, USA.
Drew B DaySeattle Children's Research Institute, Seattle, WA, USA.
Christine T LoftusUniversity of Washington, Seattle, WA, USA.
Kurunthachalam KannanNYU Grossman School of Medicine, New York City, NY, USA.
W Alex MasonUniversity of Tennessee Health Sciences Center, Memphis, TN, USA.
Nicole R BushUniversity of California San Francisco, San Francisco CA, USA.
Kaja Z LeWinnUniversity of California San Francisco, San Francisco CA, USA.
Daniel A EnquobahrieUniversity of Washington, Seattle, WA, USA.
Carmen MarsitEmory University, Atlanta, GA, USA.
Sheela SathyanarayanaSeattle Children's Research Institute, Seattle, WA, USA; University of Washington, Seattle, WA, USA.
University of Washington · USCenter for Infectious Disease Research · USUniversity of California, San Francisco · USEmory University · USNew York University · USUniversity of Tennessee Health Science Center · US

Funding

XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI Nicole Ann Errett · 1995 to 2026
$42.5M
Prenatal and Early Childhood Pathways To Health:  An Integrated Model of Chemical and Social Exposures, Biological Mechanisms, and Sex-Specific Effects on Neurodevelopment and Respiratory OutcomesUH3OD023271 · OD · UNIVERSITY OF WASHINGTON · PI BUSH, NICOLE RENEE, KARR, CATHERINE J · 2018 to 2022
$37.3M
Prenatal and Early Childhood Pathways To Health:  An Integrated Model of Chemical and Social Exposures, Biological Mechanisms, and Sex-Specific Effects on Neurodevelopment and Respiratory OutcomesUG3OD023271 · OD · UNIVERSITY OF WASHINGTON · PI BUSH, NICOLE RENEE, KARR, CATHERINE J · 2016 to 2017
$5.1M
Pregnancy Folate Status & Early Childhood Respiratory & Atopic Disease OutcomesR01HL109977 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI CARROLL, KECIA NICOLE · 2011 to 2015
$3.4M
The Role of Corticotrophin Releasing Hormone on Placental Transcriptional Networks and Birth TimingR00HD096112 · NICHD · SEATTLE CHILDREN'S HOSPITAL · PI PAQUETTE, ALISON GENEVIEVE · 2020 to 2022
$721k
The role of Corticotrophin Releasing Hormone on placental transcriptional networks and birth timingK99HD096112 · NICHD · INSTITUTE FOR SYSTEMS BIOLOGY · PI PAQUETTE, ALISON GENEVIEVE · 2018 to 2019
$258k
NHLBI NIH HHS R01 HL109977NICHD NIH HHS K99 HD096112NICHD NIH HHS R00 HD096112NIEHS NIH HHS P30 ES007033NIH HHS UG3 OD023271NIH HHS UH3 OD023271
6 · The paper itself

Abstract

backgroundPolycyclic aromatic hydrocarbons (PAHs) are ubiquitous pollutants originating from petrogenic and pyrogenic sources. PAH compounds can cross the placenta, and prenatal PAH exposure is linked to adverse infant and childhood health outcomes.

objectiveIn this first human transcriptomic assessment of PAHs in the placenta, we examined associations between prenatal PAH exposure and placental gene expression to gain insight into mechanisms by which PAHs may disrupt placental function.

methodsThe ECHO PATHWAYS Consortium quantified prenatal PAH exposure and the placental transcriptome from 629 pregnant participants enrolled in the CANDLE study. Concentrations of 12 monohydroxy-PAH (OH-PAH) metabolites were measured in mid-pregnancy urine using high performance liquid chromatography tandem mass spectrometry. Placental transcriptomic data were obtained using paired-end RNA sequencing. Linear models were fitted to estimate covariate-adjusted associations between maternal urinary OH-PAHs and placental gene expression. We performed sex-stratified analyses to evaluate whether associations varied by fetal sex. Selected PAH/gene expression analyses were validated by treating HTR-8/SVneo cells with phenanthrene, and quantifying expression via qPCR.

resultsUrinary concentrations of 6 OH-PAHs were associated with placental expression of 8 genes. Three biological pathways were associated with 4 OH-PAHs. Placental expression of SGF29 and TRIP13 as well as the vitamin digestion and absorption pathway were positively associated with multiple metabolites. HTR-8/SVneo cells treated with phenanthrene also exhibited 23 % increased TRIP13 expression compared to vehicle controls (p = 0.04). Fetal sex may modify the relationship between prenatal OH-PAHs and placental gene expression, as more associations were identified in females than males (45 vs 28 associations). DISCUSSION: Our study highlights novel genes whose placental expression may be disrupted by OH-PAHs. Increased expression of DNA damage repair gene TRIP13 may represent a response to double-stranded DNA breaks. Increased expression of genes involved in vitamin digestion and metabolism may reflect dietary exposures or represent a compensatory mechanism to combat damage related to OH-PAH toxicity. Further work is needed to study the role of these genes in placental function and their links to perinatal outcomes and lifelong health.

Indexed as

PhenanthrenesPolycyclic Aromatic HydrocarbonsPrenatal Exposure Delayed EffectsAcetyltransferasesATPases Associated with Diverse Cellular ActivitiesBiomarkersCell Cycle ProteinsChildFemaleGene Expression ProfilingHumansMalePlacentaPregnancyTranscriptomeAcetyltransferasesATPases Associated with Diverse Cellular ActivitiesBiomarkersCell Cycle ProteinsphenanthrenePhenanthrenesPolycyclic Aromatic HydrocarbonsSgf29 protein, humanTRIP13 protein, humanDevelopmental origins of health and diseasePlacentaPolycyclic aromatic hydrocarbonsTranscriptomicsTRIP13

Identifiers

PMID36689866
PMCPMC10211546
OpenAlexW4317867623

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.