Evidence map›Paper›PMID 36688929›Full record

ArticleJournal of extracellular biology2022

Biogenesis of JC polyomavirus associated extracellular vesicles.

Jenna Morris-Love, Bethany A O'Hara, Gretchen V Gee, Aisling S Dugan, Ryan S O'Rourke, Brandon E Armstead, Benedetta Assetta, Sheila A Haley, Walter J Atwood

Open access · diamondAbstract read
In one paragraph

Article in Journal of extracellular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Editorial: Viral infection pathogenesis and pathology in nervous system.Frontiers in cellular and infection microbiology · 2025
    Article
  7. Neutral sphingomyelinase 2: A promising drug target for CNS disease.Advances in pharmacology (San Diego, Calif.) · 2025
    Review
  8. Article
  9. The Conserved YPXViruses · 2024
    Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jenna Morris-LoveGraduate Program in Pathobiology, Brown University, Providence, RI, USA.ORCID 0000-0002-4853-2175
Bethany A O'HaraDepartment of Molecular biology, Cellular Biology, and Biochemistry, Brown University, Providence, RI, USA.ORCID 0000-0002-6158-5159
Gretchen V GeeDepartment of Molecular biology, Cellular Biology, and Biochemistry, Brown University, Providence, RI, USA.ORCID 0000-0003-0403-3240
Aisling S DuganDepartment of Biology, Assumption University, Worcester, MA, USA.
Ryan S O'RourkeGraduate Program in Pathobiology, Brown University, Providence, RI, USA.
Brandon E ArmsteadGraduate Program in Pathobiology, Brown University, Providence, RI, USA.ORCID 0000-0002-8774-7304
Benedetta AssettaDepartment of Molecular biology, Cellular Biology, and Biochemistry, Brown University, Providence, RI, USA.ORCID 0000-0001-7327-8001
Sheila A HaleyDepartment of Molecular biology, Cellular Biology, and Biochemistry, Brown University, Providence, RI, USA.ORCID 0000-0003-2855-5668
Walter J AtwoodDepartment of Molecular biology, Cellular Biology, and Biochemistry, Brown University, Providence, RI, USA.ORCID 0000-0002-3763-9073
Brown University · USAssumption College · USUniversity of Massachusetts Chan Medical School · US

Funding

Virus-Host Cell Interactions in AIDS-Associated PMLR01NS043097 · NINDS · BROWN UNIVERSITY · PI ATWOOD, WALTER J · 2002 to 2020
$6.1M
Progressive Multifocal Leukoenephalopathy: Endemic Viruses and Lethal Brain DiseaseR35NS116836 · NINDS · BROWN UNIVERSITY · PI Walter J Atwood · 2020 to 2026
$5.7M
NINDS NIH HHS R01 NS043097NINDS NIH HHS R35 NS116836
6 · The paper itself

Abstract

JC polyomavirus (JCPyV) is a small, non-enveloped virus that persists in the kidney in about half the adult population. In severely immune-compromised individuals JCPyV causes the neurodegenerative disease progressive multifocal leukoencephalopathy (PML) in the brain. JCPyV has been shown to infect cells by both direct and indirect mechanisms, the latter involving extracellular vesicle (EV) mediated infection. While direct mechanisms of infection are well studied indirect EV mediated mechanisms are poorly understood. Using a combination of chemical and genetic approaches we show that several overlapping intracellular pathways are responsible for the biogenesis of virus containing EV. Here we show that targeting neutral sphingomyelinase 2 (nSMase2) with the drug cambinol decreased the spread of JCPyV over several viral life cycles. Genetic depletion of nSMase2 by either shRNA or CRISPR/Cas9 reduced EV-mediated infection. Individual knockdown of seven ESCRT-related proteins including HGS, ALIX, TSG101, VPS25, VPS20, CHMP4A, and VPS4A did not significantly reduce JCPyV associated EV (JCPyV(+) EV) infectivity, whereas knockdown of the tetraspanins CD9 and CD81 or trafficking and/or secretory autophagy-related proteins RAB8A, RAB27A, and GRASP65 all significantly reduced the spread of JCPyV and decreased EV-mediated infection. These findings point to a role for exosomes and secretory autophagosomes in the biogenesis of JCPyV associated EVs with specific roles for nSMase2, CD9, CD81, RAB8A, RAB27A, and GRASP65 proteins.

Indexed as

biogenesisextracellular vesiclesJC polyomavirus

Identifiers

PMID36688929
PMCPMC9854252
OpenAlexW4225368741

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.