Evidence map›Paper›PMID 36688087›Full record

ArticleGenetics research2023

Identification of Key Biomarkers and Candidate Molecules in Non-Small-Cell Lung Cancer by Integrated Bioinformatics Analysis.

Liyan Yu, Xuemei Liang, Jianwei Wang, Guangxiang Ding, Jinhai Tang, Juan Xue, Xin He, Jingxuan Ge, Xianzhang Jin, Zhiyi Yang and 7 more

Open access · goldAbstract read
In one paragraph

Article in Genetics research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Liyan YuDepartment of Respiratory, The First Affiliated Hospital of Dalian Medical University, Dalian 116044, Liaoning Province, China.
Xuemei LiangDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Jianwei WangDepartment of Radiation Oncology, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Guangxiang DingDepartment of Radiation Oncology, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Jinhai TangDepartment of Radiation Oncology, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Juan XueDepartment of Radiation Oncology, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Xin HeDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Jingxuan GeDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Xianzhang JinDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Zhiyi YangDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Xianwei LiDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Hehuan YaoDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Hongtao YinDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Wu LiuDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Shengchen YinDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.
Bing SunDepartment of Thoracic Surgery, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.ORCID 0000-0002-0350-5835
Junxiu ShengDepartment of Radiation Oncology, First Affiliated Hospital, Dalian Medical University, Dalian 116044, China.ORCID 0000-0002-8721-978X
Dalian Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Non-small cell lung cancer (NSCLC) is the most prevalent malignant tumor of the lung cancer, for which the molecular mechanisms remain unknown. In this study, we identified novel biomarkers associated with the pathogenesis of NSCLC aiming to provide new diagnostic and therapeutic approaches for NSCLC by bioinformatics analysis. Methods: From the Gene Expression Omnibus database, GSE118370 and GSE10072 microarray datasets were obtained. Identifying the differentially expressed genes (DEGs) between lung adenocarcinoma and normal samples was done. By using bioinformatics tools, a protein-protein interaction (PPI) network was constructed, modules were analyzed, and enrichment analyses were performed. The expression and prognostic values of 14 hub genes were validated by the GEPIA database, and the correlation between hub genes and survival in lung adenocarcinoma was assessed by UALCAN, Results: We found three genes (PIK3R1, SPP1, and PECAM1) that have a clear correlation with OS in the lung adenocarcinoma patient. It has been found that lung adenocarcinoma exhibits high expression of SPP1 and that this has been associated with poor prognosis, while low expression of PECAM1 and PIK3R1 is associated with poor prognosis ( Conclusions: The results indicated that SPP1 is a cancer promoter (oncogene), while PECAM1 and PIK3R1 are cancer suppressor genes. These genes take part in the regulation of biological activities in lung adenocarcinoma, which provides a basis for improving detection and immunotherapeutic targets for lung adenocarcinoma.

Indexed as

Adenocarcinoma of LungCarcinoma, Non-Small-Cell LungLung NeoplasmsMicroRNAsBiomarkers, TumorComputational BiologyGene Expression ProfilingGene Expression Regulation, NeoplasticHumansPrognosisBiomarkers, TumorMicroRNAs

Identifiers

PMID36688087
PMCPMC9831708
OpenAlexW4313522214

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.