Evidence map›Paper›PMID 36687357›Full record

ArticleChemical science2023

Selection methods for proximity-dependent enrichment of ligands from DNA-encoded libraries using enzymatic fusion proteins.

Bo Cai, Amol B Mhetre, Casey J Krusemark

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Photocleavable Systems for Cell Biology: Conceptual Design across Molecular Modalities.Chembiochem : a European journal of chemical biology · 2025
    Review
  4. Article
  5. Article
  6. Review
  7. Mask and Release Strategy-Enabled Diversity-Oriented Synthesis for DNA-Encoded Library.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Bo CaiDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue Center for Cancer Research, Purdue University West Lafayette IN 47907 USA cjk@purdue.edu.
Amol B MhetreDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue Center for Cancer Research, Purdue University West Lafayette IN 47907 USA cjk@purdue.edu.
Casey J KrusemarkDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue Center for Cancer Research, Purdue University West Lafayette IN 47907 USA cjk@purdue.edu.ORCID https://orcid.org/0000-0003-2964-3520
Purdue University West Lafayette · US

Funding

Harnessing the In Vitro Selection for Activity-based Proteomics and Chemical Probe DevelopmentR35GM128894 · NIGMS · PURDUE UNIVERSITY · PI Casey John Krusemark · 2018 to 2026
$3.2M
NIGMS NIH HHS R35 GM128894
6 · The paper itself

Abstract

Herein, we report a selection approach to enrich ligands from DNA-encoded libraries (DELs) based on proximity to an enzymatic tag on the target protein. This method involves uncaging or installation of a biotin purification tag on the DNA construct either through photodeprotection of a protected biotin group using a light emitting protein tag (nanoluciferase) or by acylation using an engineered biotin ligase (UltraID). This selection does not require purification of the target protein and results in improved recovery and enrichment of DNA-linked ligands. This approach should serve as a general and convenient tool for molecular discovery with DELs.

Identifiers

PMID36687357
PMCPMC9811540
OpenAlexW4311366513

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.