Evidence map›Paper›PMID 36684744›Full record

ArticleFrontiers in plant science2022

Ten new high-quality genome assemblies for diverse bioenergy sorghum genotypes.

William G Voelker, Krittika Krishnan, Kapeel Chougule, Louie C Alexander, Zhenyuan Lu, Andrew Olson, Doreen Ware, Kittikun Songsomboon, Cristian Ponce, Zachary W Brenton and 2 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Structural Variation and Its Roles in Plant Genomes.Plants (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Article
  4. Genomic resources, opportunities, and prospects for accelerated improvement of millets.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

William G VoelkerDept. of Bioinformatics & Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Krittika KrishnanDept. of Bioinformatics & Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Kapeel ChouguleCold Spring Harbor Research Laboratory, Cold Spring Harbor, NY, United States.
Louie C AlexanderDept. of Bioinformatics & Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Zhenyuan LuCold Spring Harbor Research Laboratory, Cold Spring Harbor, NY, United States.
Andrew OlsonCold Spring Harbor Research Laboratory, Cold Spring Harbor, NY, United States.
Doreen WareCold Spring Harbor Research Laboratory, Cold Spring Harbor, NY, United States.
Kittikun SongsomboonDept. of Bioinformatics & Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Cristian PonceDept. of Bioinformatics & Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Zachary W BrentonCarolina Seed Systems, Darlington, SC, United States.
J Lucas BoatwrightAdvanced Plant Technology, Clemson University, Clemson, SC, United States.
Elizabeth A CooperDept. of Bioinformatics & Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Sorghum ( Methods: Expanding on a recently developed mapping population, we generated Results: We show that SVs and nonsynonymous SNPs are enriched in different gene categories, emphasizing the need for long read sequencing in crop species to identify novel variation. Furthermore, we highlight SVs and SNPs occurring in genes and pathways with known associations to critical bioenergy-related phenotypes and characterize the landscape of genetic differences between sweet and cellulosic genotypes. Discussion: These resources can be integrated into both ongoing and future mapping and trait discovery for sorghum and its myriad uses including food, feed, bioenergy, and increasingly as a carbon dioxide removal mechanism.

Indexed as

bioenergygenome assembly and annotationspangenomicssorghumstructural variation

Identifiers

PMID36684744
PMCPMC9846640

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.