Evidence map›Paper›PMID 36684483›Full record

ArticleKidney cancer journal : official journal of the Kidney Cancer Association2022

SETD2 regulates the methylation of translation elongation factor eEF1A1 in clear cell renal cell carcinoma.

Robert Hapke, Lindsay Venton, Kristie Lindsay Rose, Quanhu Sheng, Anupama Reddy, Rebecca Prather, Angela Jones, W Kimryn Rathmell, Scott M Haake

Open access · diamondAbstract read
In one paragraph

Article in Kidney cancer journal : official journal of the Kidney Cancer Association, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. KDM5D histone demethylase mediates p38α inactivation via its enzymatic activity to inhibit cancer progression.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Robert HapkePerelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Lindsay VentonDepartment of Genetic Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Kristie Lindsay RoseMass Spectrometry Research Center, Proteomics Core Laboratory, Vanderbilt University, Nashville, TN, USA.
Quanhu ShengDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA.
Anupama ReddyVindhya Data Science, Morrisville, NC, USA.
Rebecca PratherDivision of Hematology/Oncology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Angela JonesVanderbilt Technologies for Advanced Genomics (VANTAGE), Vanderbilt University Medical Center, Nashville, TN, USA.
W Kimryn RathmellDivision of Hematology/Oncology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Scott M HaakeDivision of Hematology/Oncology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Vanderbilt University Medical Center · USUniversity of Pennsylvania · USVanderbilt University · US

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
Vanderbilt Clinical Oncology Research Career Development ProgramK12CA090625 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Debra L. Friedman, Paula Jill Hurley · 2001 to 2026
$16.9M
Constitutive Integrin Beta1 Signaling in Lung CancerK08CA241351 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI HAAKE, SCOTT · 2020 to 2024
$968k
NCATS NIH HHS UL1 TR002243NCI NIH HHS K08 CA241351NCI NIH HHS K12 CA090625
6 · The paper itself

Abstract

backgroundSET domain-containing protein 2 (

objectiveInitially, we sought to explore SETD2-dependent changes in lysine methylation of proteins in proximal renal tubule cells. Subsequently, we focused on changes in lysine methylation of the translation elongation factor eEF1A1.

methodsTo accomplish these objectives, we initially performed a systems-wide analysis of protein lysine-methylation and expression in wild type (WT) and

resultsWe observed decreased lysine methylation of the translation elongation factor eEF1A1.

conclusionOverall, these data suggest that

Indexed as

clear cell renal cell carcinomaeEF1A1protein translationproteomicsSETD2

Identifiers

PMID36684483
PMCPMC9851421
OpenAlexW4307806247

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.