Evidence map›Paper›PMID 36684108›Full record

ArticleBioengineering & translational medicine2023

A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs.

Bonhan Koo, Yunlim Kim, Yoon Ok Jang, Huifang Liu, Myoung Gyu Kim, Hyo Joo Lee, Myung Kyun Woo, Choung-Soo Kim, Yong Shin

Open access · goldAbstract read
In one paragraph

Article in Bioengineering & translational medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Bonhan KooDepartment of Biotechnology, College of Life Science and Biotechnology Yonsei University Seodaemun-gu, Seoul Republic of Korea.
Yunlim KimDepartment of Urology, Asan Medical Center University of Ulsan College of Medicine Songpa-gu, Seoul Republic of Korea.
Yoon Ok JangDepartment of Biotechnology, College of Life Science and Biotechnology Yonsei University Seodaemun-gu, Seoul Republic of Korea.
Huifang LiuDepartment of Biotechnology, College of Life Science and Biotechnology Yonsei University Seodaemun-gu, Seoul Republic of Korea.
Myoung Gyu KimDepartment of Biotechnology, College of Life Science and Biotechnology Yonsei University Seodaemun-gu, Seoul Republic of Korea.
Hyo Joo LeeDepartment of Biotechnology, College of Life Science and Biotechnology Yonsei University Seodaemun-gu, Seoul Republic of Korea.
Myung Kyun WooDepartment of Biomedical Engineering School of Electrical Engineering, University of Ulsan Nam-gu, Ulsan Republic of Korea.
Choung-Soo KimDepartment of Urology, Asan Medical Center University of Ulsan College of Medicine Songpa-gu, Seoul Republic of Korea.
Yong ShinDepartment of Biotechnology, College of Life Science and Biotechnology Yonsei University Seodaemun-gu, Seoul Republic of Korea.ORCID https://orcid.org/0000-0002-7426-4717
Yonsei University · KRUlsan College · KRUniversity of Ulsan · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changes in specific circulating RNA (circRNA) expressions can serve as diagnostic noninvasive biomarkers for prostate cancer (PCa). However, there are still unmet needs, such as unclear types and roles of circRNAs, PCa detection in benign prostatic hyperplasia (BPH) by unstandardized methods, and limitations of sample volume capacity and low circRNA concentrations. This study reports a simple and rapid circRNA enrichment and isolation technique named "HAZIS-CirR" for the analysis of urinary circRNAs. The method utilizes homobifunctional hydrazides with amine-modified zeolite and polyvinylidene fluoride (PVDF) syringe filtration for combining electrostatic and covalent coupling and size-based filtration, and it offers instrument-free isolation of circRNAs in 20 min without volume limitation, thermoregulation, and lysis. HAZIS-CirR has high capture efficiency (82.03%-92.38%) and a 10-fold more sensitive detection limit (20 fM) than before enrichment (200 fM). The clinical utility of HAZIS-CirR is confirmed by analyzing circulating mRNAs and circulating miRNAs in 89 urine samples. Furthermore, three miRNA panels that differentiate PCa from BPH and control, PCa from control, and BPH from control, respectively, are established by comparing miRNA levels. HAZIS-CirR will be used as an optimal and established method for the enrichment and isolation of circRNAs as diagnostic, prognostic, and predictive biomarkers in human cancers.

Indexed as

benign prostatic hyperplasiacirculating RNAenrichmenthomobifunctional hydrazideprostate cancer

Identifiers

PMID36684108
PMCPMC9842063
OpenAlexW4281611581

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.