Evidence map›Paper›PMID 36683035›Full record

ArticleBMC plant biology2023

Lipidomic and transcriptomic profiles of glycerophospholipid metabolism during Hemerocallis citrina Baroni flowering.

Aihua Guo, Yang Yang, Jiang Wu, Nannan Qin, Feifan Hou, Yang Gao, Ke Li, Guoming Xing, Sen Li

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
16.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Aihua GuoDepartment of life science, Lyuliang University, Lvliang, 033000, China.
Yang YangDepartment of life science, Lyuliang University, Lvliang, 033000, China.
Jiang WuCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, China.
Nannan QinCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, China.
Feifan HouCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, China.
Yang GaoCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, China.
Ke LiCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, China.
Guoming XingCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, China. xingguoming@163.com.
Sen LiCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, China. saulisen@163.com.
Shanxi Agricultural University · CNLuliang University · CN

Funding

Biological breeding engineering of Shanxi Agricultural University YZGC122Scientific and Technological Innovation Programs of Higher Education Institutions in Shanxi 2020L0693Shanxi Province Basic Research Plan 202103021223384the Key Research and Development Project of Shanxi Province 201903D211011
6 · The paper itself

Abstract

backgroundHemerocallis citrina Baroni (daylily) is a horticultural ornamental plant and vegetable with various applications as a raw material in traditional Chinese medicine and as a flavouring agent. Daylily contains many functional substances and is rich in lecithin, which is mostly composed of glycerophospholipids. To study the comprehensive dynamic changes in glycerophospholipid during daylily flowering and the underlying signalling mechanisms, we performed comprehensive, time-resolved lipidomic and transcriptomic analyses of 'Datong Huanghua 6' daylily.

resultsLabelling with PKH67 fluorescent antibodies clearly and effectively helped visualise lipid changes in daylily, while relative conductivity and malonaldehyde content detection revealed that the early stages of flowering were controllable processes; however, differences became non-significant after 18 h, indicating cellular damage. In addition, phospholipase D (PLD) and lipoxygenase (LOX) activities increased throughout the flowering process, suggesting that lipid hydrolysis and oxidation had intensified. Lipidomics identified 558 lipids that changed during flowering, with the most different lipids found 12 h before and 12 h after flowering. Transcriptome analysis identified 13 key functional genes and enzymes in the glycerophospholipid metabolic pathway. The two-way orthogonal partial least squares analysis showed that diacylglycerol diphosphate phosphatase correlated strongly and positively with phosphatidic acid (PA)(22:0/18:2), PA(34:2), PA(34:4), and diacylglycerol(18:2/21:0) but negatively with phospholipase C. In addition, ethanolamine phosphotransferase gene and phospholipid-N-methyltransferase gene correlated positively with phosphatidylethanolamine (PE)(16:0/18:2), PE(16:0/18:3), PE(33:2), and lysophosphatidylcholine (16:0) but negatively with PE(34:1).

conclusionsOverall, this study elucidated changes in the glycerophospholipid metabolism pathway during the daylily flowering process, as well as characteristic genes, thus providing a basis for future studies of glycerophospholipids and signal transduction in daylilies.

Indexed as

HemerocallisDiglyceridesGlycerophospholipidsLipidomicsPhosphatidic AcidsTranscriptomeDiglyceridesGlycerophospholipidsPhosphatidic AcidsGlycerophospholipidsHemerocallis citrina BaroniLipidomicsTranscriptomics

Identifiers

PMID36683035
PMCPMC9869519
OpenAlexW4317716370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.