Evidence map›Paper›PMID 36680454›Full record

ArticleThe Journal of antimicrobial chemotherapy2023

Baseline prevalence of molecular marker of sulfadoxine/pyrimethamine resistance in Ebonyi and Osun states, Nigeria: amplicon deep sequencing of dhps-540.

Adeola Y Olukosi, Olusola Ajibaye, Omowunmi Omoniwa, Olusola Oresanya, Aina O Oluwagbemiga, Chinazo Ujuju, Michael Ekholuenetale, Kolawole Maxwell, Colin J Sutherland, James K Tibenderana and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Adeola Y OlukosiDepartment of Biochemistry and Nutrition, Nigerian Institute of Medical Research, Edmond Crescent, 101212 Yaba, Lagos, Nigeria.
Olusola AjibayeDepartment of Biochemistry and Nutrition, Nigerian Institute of Medical Research, Edmond Crescent, 101212 Yaba, Lagos, Nigeria.
Omowunmi OmoniwaMalaria Consortium, 33 Pope John Paul II St, Maitama 904101, Abuja, Nigeria.
Olusola OresanyaMalaria Consortium, 33 Pope John Paul II St, Maitama 904101, Abuja, Nigeria.
Aina O OluwagbemigaDepartment of Biochemistry and Nutrition, Nigerian Institute of Medical Research, Edmond Crescent, 101212 Yaba, Lagos, Nigeria.
Chinazo UjujuMalaria Consortium, 33 Pope John Paul II St, Maitama 904101, Abuja, Nigeria.
Michael EkholuenetaleMalaria Consortium, 33 Pope John Paul II St, Maitama 904101, Abuja, Nigeria.
Kolawole MaxwellMalaria Consortium, 33 Pope John Paul II St, Maitama 904101, Abuja, Nigeria.
Colin J SutherlandFaculty of Infectious Diseases, London School of Hygiene and Tropical Medicine, Keppel Street, , London WC1E 7HT, UK.ORCID 0000-0003-1592-6407
James K TibenderanaMalaria Consortium Headquarters, The Green House, 244-254 Cambridge Heath Road, London E2 9DA, UK.
Khalid B BeshirFaculty of Infectious Diseases, London School of Hygiene and Tropical Medicine, Keppel Street, , London WC1E 7HT, UK.ORCID 0000-0001-5108-8362
AIDS Prevention Initiative in Nigeria · NGNigerian Institute of Medical Research · NGUniversity of London · GBMalaria Consortium · GB

Funding

Medical Research Council MR/T016124/1
6 · The paper itself

Abstract

backgroundChemoprevention plays an important role in malaria control strategy. Perennial malaria chemoprevention (PMC) using sulfadoxine/pyrimethamine (SP) is a WHO-approved strategy to combat malaria in young children and may lead to drug pressure. Introducing SP-PMC may therefore be compromised due to the emergence of Plasmodium falciparum resistant to SP, particularly mutation at K540E of the dihydropteroate synthase (dhps) gene. Molecular surveillance of resistance markers can support assessment of antimalarial efficacy and effectiveness. High prevalence of 540E is associated with reduced effectiveness of SP, and areas with more than 50% prevalence are considered unsuitable for intermittent preventative treatment in pregnancy (IPTp) implementation. Assessing 540E prevalence is an important undertaking before implementation of SP-PMC.

methodsWe conducted a rapid surveillance of dhps-540E to assess the suitability of SP as PMC in field studies from Ebonyi and Osun states in Nigeria. We used an in-house developed amplicon deep-sequencing method targeting part of the dhps gene.

resultsOur data reveal that 18.56% of individuals evaluated carried the 540E mutation mixed with the WT K540. Mutant variant 540E alone was not found, and 80% of isolates harboured only WT (K540). Clonal analysis of the sequencing data shows a very low proportion of 540E circulating in both states.

conclusionsOur data show that both states are suitable for SP-PMC implementation and, based on this finding, SP-PMC was implemented in Osun in 2022. Continuous monitoring of 540E will be required to ensure the chemoprevention effectiveness of SP in Nigeria.

Indexed as

AntimalarialsMalariaMalaria, FalciparumBiomarkersChildChild, PreschoolDihydropteroate SynthaseDrug CombinationsDrug ResistanceFemaleHigh-Throughput Nucleotide SequencingHumansNigeriaPlasmodium falciparumPregnancyPrevalenceAntimalarialsBiomarkersDihydropteroate SynthaseDrug CombinationsPyrimethamineSulfadoxine

Identifiers

PMID36680454
PMCPMC9978573
OpenAlexW4317653950

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.