Evidence map›Paper›PMID 36680205›Full record

ArticleViruses2023

Recombination and Mutation in a New HP-PRRSV Strain (SD2020) from China.

Yang Xia, Tianying Zhang, Dengmei Gong, Juan Qi, Shenghai Jiang, Hao Yang, Xianchang Zhu, Yu Gan, Yi Zhang, Yanyan Han and 2 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Yang XiaInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Tianying ZhangShijiazhuang Fuli Properties Co., Ltd., Shijiazhuang 050000, China.
Dengmei GongInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Juan QiAnimal Husbandry Development and Service Center in Jimo District, Qingdao 266000, China.
Shenghai JiangInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Hao YangInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Xianchang ZhuInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Yu GanInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Yi ZhangInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Yanyan HanInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Yan LiInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.
Jida LiInstitute of Zoonosis, College of Public Health, Zunyi Medical University, Zunyi 563000, China.ORCID 0000-0002-2839-4393
Zunyi Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A new HP-PRRSV strain (SD2020) was isolated from pigs with suspected highly pathogenic porcine reproductive and respiratory syndrome disease in a pig farm in Shandong Province, China, and its genome was sequenced. This pig farm has been using the VR-2332 vaccine strain to immunize pigs for a long time. The phylogenic and single nucleotide polymorphisms (SNPs) analysis of the viruses isolated from dead pigs showed that SD2020 was a natural recombinant virus of the VR-2332 vaccine strain and the JXA1 similar strain, and that two splicing fragments highly homologous to JXA1 in the virus genome were probably derived from the JXA1 wild strain and JXA1-R vaccine strain, respectively. Therefore, the possible recombination events of SD2020 and its mutation site might be related to high pathogenicity.

Indexed as

Porcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusAnimalsChinaGenome, ViralMutationPhylogenyRecombination, GeneticSwineHP-PRRSVrecombinant virusvaccine

Identifiers

PMID36680205
PMCPMC9864264
OpenAlexW4313571670

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.