Evidence map›Paper›PMID 36680087›Full record

ArticleViruses2022

Analysis of Template Variations on RNA Synthesis by Respiratory Syncytial Virus Polymerase.

Dongdong Cao, Inesh Gooneratne, Cristopher Mera, Jenny Vy, Maurice Royal, Bozun Huang, Yuri Park, Ambika Manjunath, Bo Liang

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Dongdong CaoDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Inesh GooneratneDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Cristopher MeraDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Jenny VyDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Maurice RoyalDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Bozun HuangDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Yuri ParkDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Ambika ManjunathDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Bo LiangDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.ORCID 0000-0002-5617-9228
Emory University · US

Funding

Structure and Regulation of The Respiratory Syncytial Virus PolymeraseR01GM130950 · NIGMS · EMORY UNIVERSITY · PI Bo Liang · 2019 to 2026
$3.3M
NIGMS NIH HHS R01 GM130950
6 · The paper itself

Abstract

Respiratory syncytial virus (RSV) is a significant threat to infants and elderly individuals globally. Currently, there are no effective therapies or treatments for RSV infection because of an insufficient understanding of the RSV viral machinery. In this study, we investigated the effects of the template variations on RNA synthesis by the RSV polymerase through in vitro RNA synthesis assays. We confirmed the previously reported back-priming activity of the RSV polymerase, which is likely due to the secondary structure of the RNA template. We found that the expansion of the hairpin loop size of the RNA template abolishes the RSV polymerase back-priming activity. At the same time, it seemingly does not affect the de novo RNA synthesis activities of the RSV polymerase. Interestingly, our results show that the RSV polymerase also has a new primer-based terminal extension activity that adds nucleotides to the template and primer in a nonspecific manner. We also mapped the impact of the RNA 5' chemical group on its mobility in a urea-denaturing RNA gel shift assay. Overall, these results enhance our knowledge about the RNA synthesis processes of the RSV polymerase and may guide future therapeutic efforts to develop effective antiviral drugs for RSV treatment.

Indexed as

Respiratory Syncytial Virus, HumanRNA-Dependent RNA PolymeraseRNA, ViralNucleotidyltransferasesVirus ReplicationNucleotidyltransferasesRNA-Dependent RNA PolymeraseRNA, Viralback-priming elongationde novo RNA synthesisprimer-based elongationrespiratory syncytial virus (RSV)RNA-dependent RNA polymerase (RdRp)RNA gel shift assayRNA secondary structuretemplate variations

Identifiers

PMID36680087
PMCPMC9863079
OpenAlexW4313259422

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.