Evidence map›Paper›PMID 36677748›Full record

ArticleMolecules (Basel, Switzerland)2023

Identifying Potential Molecular Targets in Fungi Based on (Dis)Similarities in Binding Site Architecture with Proteins of the Human Pharmacolome.

Johann E Bedoya-Cardona, Marcela Rubio-Carrasquilla, Iliana M Ramírez-Velásquez, Mario S Valdés-Tresanco, Ernesto Moreno

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Johann E Bedoya-CardonaFacultad de Ciencias Básicas, Universidad de Medellín, Medellin 050026, Colombia.
Marcela Rubio-CarrasquillaFacultad de Ciencias Básicas, Universidad de Medellín, Medellin 050026, Colombia.
Iliana M Ramírez-VelásquezFacultad de Ciencias Básicas, Universidad de Medellín, Medellin 050026, Colombia.ORCID 0000-0001-9779-4019
Mario S Valdés-TresancoFacultad de Ciencias Básicas, Universidad de Medellín, Medellin 050026, Colombia.ORCID 0000-0002-1291-1587
Ernesto MorenoFacultad de Ciencias Básicas, Universidad de Medellín, Medellin 050026, Colombia.ORCID 0000-0002-2309-4826
Universidad de Medellín · COCorporación para Investigaciones Biológicas · CO

Funding

Minciencias 795-2018
6 · The paper itself

Abstract

Invasive fungal infections represent a public health problem that worsens over the years with the increasing resistance to current antimycotic agents. Therefore, there is a compelling medical need of widening the antifungal drug repertoire, following different methods such as drug repositioning, identification and validation of new molecular targets and developing new inhibitors against these targets. In this work we developed a structure-based strategy for drug repositioning and new drug design, which can be applied to infectious fungi and other pathogens. Instead of applying the commonly accepted off-target criterion to discard fungal proteins with close homologues in humans, the core of our approach consists in identifying fungal proteins with active sites that are structurally similar, but preferably not identical to binding sites of proteins from the so-called "human pharmacolome". Using structural information from thousands of human protein target-inhibitor complexes, we identified dozens of proteins in fungal species of the genera

Indexed as

Antifungal AgentsMycosesCandidaCatalytic DomainFungal ProteinsFungiHumansAntifungal AgentsFungal Proteinsdrug developmentdrug repurposingfungal pathogensMEK inhibitorsnew therapeutic targetsstructural bioinformatics

Identifiers

PMID36677748
PMCPMC9860719
OpenAlexW4315648093

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.