Evidence map›Paper›PMID 36676727›Full record

ArticleMedicina (Kaunas, Lithuania)2023

Identification and

Abdulhadi Almazroea, Ambreen Ijaz, Abdul Aziz, Muhammad Mushtaq Yasinzai, Rafiullah Rafiullah, Fazal Ur Rehman, Shakeela Daud, Rozeena Shaikh, Muhammad Ayub, Abdul Wali

Open access · goldAbstract read
In one paragraph

Article in Medicina (Kaunas, Lithuania), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Abdulhadi AlmazroeaPediatrician, Associate Professor at College of Medicine, Taibah University, Madinah 41477, Saudi Arabia.
Ambreen IjazDepartment of Biotechnology, Faculty of Life Sciences & Informatics, BUITEMS, Quetta 87300, Pakistan.ORCID 0000-0001-7748-5323
Abdul AzizDepartment of Computer Sciences and Bioinformatics, Khushal Khan Khattak University, Karak 27200, Pakistan.
Muhammad Mushtaq YasinzaiDepartment of Biotechnology, Faculty of Life Sciences & Informatics, BUITEMS, Quetta 87300, Pakistan.ORCID 0000-0002-0896-3720
Rafiullah RafiullahDepartment of Biotechnology, Faculty of Life Sciences & Informatics, BUITEMS, Quetta 87300, Pakistan.
Fazal Ur RehmanDepartment of Microbiology, University of Balochistan, Quetta 87550, Pakistan.
Shakeela DaudDepartment of Biotechnology, Faculty of Life Sciences & Informatics, BUITEMS, Quetta 87300, Pakistan.
Rozeena ShaikhDepartment of Biotechnology, Faculty of Life Sciences & Informatics, BUITEMS, Quetta 87300, Pakistan.
Muhammad AyubInstitute of Biochemistry, University of Balochistan, Quetta 87550, Pakistan.
Abdul WaliDepartment of Biotechnology, Faculty of Life Sciences & Informatics, BUITEMS, Quetta 87300, Pakistan.
Balochistan University of Information Technology, Engineering and Management Sciences · PKUniversity of Balochistan · PKKhushal Khan Khattak University KarakTaibah University · SA

Funding

Higher Education Commission 5265/NRPU/HEC/2016
6 · The paper itself

Abstract

Background and Objectives: Lamellar ichthyosis is a rare skin disease characterized by large, dark brown plate-like scales on the entire body surface with minimum or no erythema. This phenotype is frequently associated with a mutation in the TGM1 gene, encoding the enzyme transglutaminase 1 which plays a catalytic role in the formation of the cornified cell envelop. The present study aimed to carry out clinical and genetic characterization of the autosomal recessive lamellar ichthyosis family from Balochistan. Materials and Methods: A consanguineous family with lamellar ichthyosis was enrolled from Balochistan, Pakistan. PCR amplification of all the exons and splice site junctions of the TGM1 gene followed by Sanger sequencing was performed on the genomic DNA. The identified variant was checked by In silico prediction tools to evaluate the effect of the variant on protein. Results: Sanger sequencing identified a homozygous nonsense variant c.131G >A (p.Trp44*) in the TGM1 gene that segregated in the autosomal recessive mode of inheritance in the family. The identified variant results in premature termination of transcribed mRNA and is predicted to cause a truncated or absent translation product transglutaminase-1 (TGase-1) accompanied by loss of catalytic activity, causing a severe clinical phenotype of lamellar ichthyosis in the patients. Conclusions: Here, we report a consanguineous lamellar ichthyosis family with a homozygous nonsense variant in the TGM1 gene. The variant is predicted as pathogenic by different In silico prediction tools.

Indexed as

Ichthyosis, LamellarExonsHumansMutationPhenotypeSkinin silico analysislamellar ichthyosisnonsense mutationTGM1

Identifiers

PMID36676727
PMCPMC9866252
OpenAlexW4313435476

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.