Evidence map›Paper›PMID 36675868›Full record

ArticleJournal of fungi (Basel, Switzerland)2022

Development of a Method for Detecting and Estimating

Diana L Jiménez-Zapata, Manuela Quiroga-Pérez, Manuela Quiroz-Yepes, Alejandro Marulanda-Tobón, Javier C Álvarez, Sandra Mosquera-López

Abstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Efficacy of a biofungicide based onFrontiers in plant science · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Diana L Jiménez-ZapataDivision of Natural Systems and Sustainability, School of Applied Sciences and Engineering, EAFIT University, Medellín 050021, Colombia.
Manuela Quiroga-PérezDivision of Natural Systems and Sustainability, School of Applied Sciences and Engineering, EAFIT University, Medellín 050021, Colombia.
Manuela Quiroz-YepesDivision of Natural Systems and Sustainability, School of Applied Sciences and Engineering, EAFIT University, Medellín 050021, Colombia.
Alejandro Marulanda-TobónDivision of Natural Systems and Sustainability, School of Applied Sciences and Engineering, EAFIT University, Medellín 050021, Colombia.ORCID 0000-0001-7327-9231
Javier C ÁlvarezDivision of Natural Systems and Sustainability, School of Applied Sciences and Engineering, EAFIT University, Medellín 050021, Colombia.ORCID 0000-0001-9009-823X
Sandra Mosquera-LópezDivision of Natural Systems and Sustainability, School of Applied Sciences and Engineering, EAFIT University, Medellín 050021, Colombia.

Funding

Colombian Ministry of Science 848-2019EAFIT University 954-000005
6 · The paper itself

Abstract

Frosty pod rot, caused by Moniliophthora roreri, is the most damaging disease of cacao in Latin America and, to better comprehend its epidemiology, we must understand its dissemination and proliferation. However, we do not know how M. roreri spores loads fluctuate in time and space due to the lack of a reliable technique to quantify M. roreri spores in the fields. Therefore, we developed a method that relies on spore traps and qPCR to detect and quantify M. roreri spore loads. This study demonstrated that the qPCR protocol can detect down to 0.025 ng of M. roreri DNA and quantify between 0.006 ng and 60 ng. Moreover, it demonstrated that qPCR protocol can detect and quantify DNA extracted from spore suspension and spore traps containing at least 2.9 × 104 M. roreri spores. However, the variability of the estimates for spore samples was high. Finally, we described a spore-trap device designed to carry spore traps in the field. The qPCR protocol and spore-trap device here developed will help in the understanding of the M. roreri dissemination patterns since they can be used to assess the environmental loads of M. roreri spore in cacao fields.

Indexed as

frosty pod rotmoniliasisqPCRspore trapTheobroma cacao

Identifiers

PMID36675868
PMCPMC9862605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.