Evidence map›Paper›PMID 36674888›Full record

ArticleInternational journal of molecular sciences2023

The Diffusion Model of Intra-Golgi Transport Has Limited Power.

Galina V Beznoussenko, Andrei Iu Bejan, Seetharaman Parashuraman, Alberto Luini, Hee-Seok Kweon, Alexander A Mironov

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The 50-nm Free Vesicles Visible inCurrent issues in molecular biology · 2025
    Article
  5. Article
  6. Review
  7. Understanding the Golgi Apparatus and Intracellular Transport Pathways.International journal of molecular sciences · 2023
    Article
  8. COVID-19 Biogenesis and Intracellular Transport.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Galina V BeznoussenkoIFOM ETS, The AIRC Institute of Molecular Oncology, Via Adamello 16, 20139 Milan, Italy.
Andrei Iu BejanSchool of Mathematical and Computer Sciences, Heriot-Watts University, Edinburgh EH14 4AS, UK.
Seetharaman ParashuramanInstitute of Endocrinology and Experimental Oncology, Via P. Castellino, 111, 80131 Napoli, Italy.
Alberto LuiniInstitute of Endocrinology and Experimental Oncology, Via P. Castellino, 111, 80131 Napoli, Italy.
Hee-Seok KweonCenter for Research Equipment, Korea Basic Science Institute, 169-148, Gwahak-ro, Yuseong-gu, Daejeon 34133, Republic of Korea.
Alexander A MironovIFOM ETS, The AIRC Institute of Molecular Oncology, Via Adamello 16, 20139 Milan, Italy.ORCID 0000-0003-2308-1651
IFOM · ITInstitute for Experimental Endocrinology and Oncology · ITHeriot-Watt University · GBKorea Basic Science Institute · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Golgi complex (GC) is the main station along the cell biosecretory pathway. Until now, mechanisms of intra-Golgi transport (IGT) have remained unclear. Herein, we confirm that the goodness-of-fit of the regression lines describing the exit of a cargo from the Golgi zone (GZ) corresponds to an exponential decay. When the GC was empty before the re-initiation of the intra-Golgi transport, this parameter of the curves describing the kinetics of different cargoes (which are deleted in Golgi vesicles) with different diffusional mobilities within the GZ as well as their exit from the GZ was maximal for the piecewise nonlinear regression, wherein the first segment was horizontal, while the second segment was similar to the exponential decay. The kinetic curve describing cargo exit from the GC per se resembled a linear decay. The Monte-Carlo simulation revealed that such curves reflect the role of microtubule growth in cells with a central GC or the random hovering of ministacks in cells lacking a microtubule. The synchronization of cargo exit from the GC already filled with a cargo using the wave synchronization protocol did not reveal the equilibration of cargo within a Golgi stack, which would be expected from the diffusion model (DM) of IGT. Moreover, not all cisternae are connected to each other in mini-stacks that are transporting membrane proteins. Finally, the kinetics of post-Golgi carriers and the important role of SNAREs for IGT at different level of IGT also argue against the DM of IGT.

Indexed as

Golgi ApparatusBiological TransportDiffusionProtein TransportCOPI vesiclediffusion modelGolgi apparatusGolgi complexintracellular transportkiss-and-run

Identifiers

PMID36674888
PMCPMC9861033
OpenAlexW4315499039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.