Evidence map›Paper›PMID 36674608›Full record

ArticleInternational journal of molecular sciences2023

Mutational Landscape of Bladder Cancer in Mexican Patients:

María D Pérez-Montiel, Dennis Cerrato-Izaguirre, Yesennia Sánchez-Pérez, Jose Diaz-Chavez, Carlo César Cortés-González, Jairo A Rubio, Miguel A Jiménez-Ríos, Luis A Herrera, Anna Scavuzzo, Abelardo Meneses-García and 6 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

María D Pérez-MontielDepartamento de Patología, Instituto Nacional de Cancerología (INCan), Mexico City 14080, Mexico.
Dennis Cerrato-IzaguirreDepartamento de Farmacología, Centro de Investigación y de Estudios Avanzados del I.P.N. (CINVESTAV), Avenida Instituto Politécnico Nacional No. 2508, Mexico City 07360, Mexico.ORCID 0000-0002-6556-1998
Yesennia Sánchez-PérezSubdirección de Investigación Básica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.
Jose Diaz-ChavezSubdirección de Investigación Básica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.ORCID 0000-0001-9583-3790
Carlo César Cortés-GonzálezSubdirección de Investigación Básica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.ORCID 0000-0001-5516-6081
Jairo A RubioSubdirección de Investigación Básica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.
Miguel A Jiménez-RíosDepartamento de Urología, Instituto Nacional de Cancerología (INCan), Mexico City 14080, Mexico.
Luis A HerreraDirección General, Instituto Nacional de Medicina Genómica, Mexico City 14610, Mexico.ORCID 0000-0003-3998-9306
Anna ScavuzzoDepartamento de Urología, Instituto Nacional de Cancerología (INCan), Mexico City 14080, Mexico.
Abelardo Meneses-GarcíaDirección GENERAL, Instituto Nacional de Cancerología (INCan), Mexico City 14080, Mexico.
Ricardo Hernández-MartínezSubdirección de Investigación Básica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.ORCID 0000-0002-9376-8363
Felipe Vaca-PaniaguaLaboratorio Nacional en Salud, Diagnóstico Molecular y Efecto Ambiental en Enfermedades Crónico-Degenerativas, Facultad de Estudios Superiores Iztacala, Tlalnepantla 54090, Mexico.ORCID 0000-0002-2200-9706
Andrea RamírezUnidad de Apoyo Molecular a la Investigación Clínica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.
Alicia OrozcoUnidad de Apoyo Molecular a la Investigación Clínica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.
David Cantú-de-LeónDirección de Investigación, Instituto Nacional de Cancerología (INCan), Mexico City 14080, Mexico.
Diddier PradaSubdirección de Investigación Básica, Instituto Nacional de Cancerología (INCan), San Fernando No. 22, Tlalpan, Mexico City 14080, Mexico.
Instituto Nacional de Cancerología · MXNational Institute of Genomic Medicine · MX

Funding

Early Exposure to Persistent Organic Pollutants, Breast Milk Extracellular Vesicles and Abnormal Cardiometabolic ProgrammingR21ES027087 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BACCARELLI, ANDREA, PRADA, DIDDIER GIOVANNI · 2016 to 2017
$438k
Consejo Nacional de Ciencia y Tecnología FOSISS-2017-289503Consejo Nacional de Ciencia y Tecnología FOSISS-2017-29041NIEHS NIH HHS R21ES027087
6 · The paper itself

Abstract

Bladder cancer (BC) is the most common neoplasm of the urinary tract, which originates in the epithelium that covers the inner surface of the bladder. The molecular BC profile has led to the development of different classifications of non-muscle invasive bladder cancer (NMIBC) and muscle-invasive bladder cancer (MIBC). However, the genomic BC landscape profile of the Mexican population, including NMIBC and MIBC, is unknown. In this study, we aimed to identify somatic single nucleotide variants (SNVs) and copy number variations (CNVs) in Mexican patients with BC and their associations with clinical and pathological characteristics. We retrospectively evaluated 37 patients treated between 2012 and 2021 at the National Cancer Institute-Mexico (INCan). DNA samples were obtained from paraffin-embedded tumor tissues and exome sequenced. Strelka2 and Lancet packages were used to identify SNVs and insertions or deletions. FACETS was used to determine CNVs. We found a high frequency of mutations in

Indexed as

DNA-Binding ProteinsDNA Copy Number VariationsNeoplasm ProteinsUrinary Bladder NeoplasmsHumansMexicoMutationNeoplasm InvasivenessRetrospective StudiesDNA-Binding ProteinsKMT2D protein, humanNeoplasm Proteinsbladder cancercancer genomicsHispanicsMexican populationmuscle-invasive bladder cancermutationsnon-muscle invasive bladder cancer

Identifiers

PMID36674608
PMCPMC9866210
OpenAlexW4313647293

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.