Evidence map›Paper›PMID 36674470›Full record

ArticleInternational journal of molecular sciences2023

Top-Down Proteomics Detection of Potential Salivary Biomarkers for Autoimmune Liver Diseases Classification.

Alessandra Olianas, Giulia Guadalupi, Tiziana Cabras, Cristina Contini, Simone Serrao, Federica Iavarone, Massimo Castagnola, Irene Messana, Simona Onali, Luchino Chessa and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Observational
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Salivary proteomic profile of young healthy subjects.Frontiers in molecular biosciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Alessandra OlianasDipartimento di Scienze della Vita e dell'Ambiente, Università di Cagliari, 09042 Cagliari, Italy.
Giulia GuadalupiDipartimento di Scienze della Vita e dell'Ambiente, Università di Cagliari, 09042 Cagliari, Italy.ORCID 0000-0002-0448-276X
Tiziana CabrasDipartimento di Scienze della Vita e dell'Ambiente, Università di Cagliari, 09042 Cagliari, Italy.
Cristina ContiniDipartimento di Scienze della Vita e dell'Ambiente, Università di Cagliari, 09042 Cagliari, Italy.ORCID 0000-0002-0903-4675
Simone SerraoDipartimento di Scienze della Vita e dell'Ambiente, Università di Cagliari, 09042 Cagliari, Italy.
Federica IavaroneFondazione Policlinico Universitario "A. Gemelli"-IRCCS, 00168 Rome, Italy.ORCID 0000-0002-2074-5531
Massimo CastagnolaLaboratorio di Proteomica, Centro Europeo di Ricerca sul Cervello, IRCCS Fondazione Santa Lucia, 00179 Rome, Italy.ORCID 0000-0002-0959-7259
Irene MessanaIstituto di Scienze e Tecnologie Chimiche "Giulio Natta", Consiglio Nazionale delle Ricerche, 00168 Rome, Italy.ORCID 0000-0002-1436-6105
Simona OnaliLiver Unit, University Hospital of Cagliari, 09042 Cagliari, Italy.
Luchino ChessaLiver Unit, University Hospital of Cagliari, 09042 Cagliari, Italy.ORCID 0000-0002-9474-0995
Giacomo DiazDipartimento di Scienze Biomediche, Università di Cagliari, 09042 Cagliari, Italy.
Barbara ManconiDipartimento di Scienze della Vita e dell'Ambiente, Università di Cagliari, 09042 Cagliari, Italy.ORCID 0000-0002-2880-9915
University of Cagliari · ITAgostino Gemelli University Polyclinic · ITFondazione Santa Lucia · ITIstituto di Chimica Biomolecolare · IT

Funding

University of Cagliari FIR 2020
6 · The paper itself

Abstract

(1) Autoimmune hepatitis (AIH) and primary biliary cholangitis (PBC) are autoimmune liver diseases characterized by chronic hepatic inflammation and progressive liver fibrosis. The possible use of saliva as a diagnostic tool has been explored in several oral and systemic diseases. The use of proteomics for personalized medicine is a rapidly emerging field. (2) Salivary proteomic data of 36 healthy controls (HCs), 36 AIH and 36 PBC patients, obtained by liquid chromatography/mass spectrometry top-down pipeline, were analyzed by multiple Mann-Whitney test, Kendall correlation, Random Forest (RF) analysis and Linear Discriminant Analysis (LDA); (3) Mann-Whitney tests provided indications on the panel of differentially expressed salivary proteins and peptides, namely cystatin A, statherin, histatin 3, histatin 5 and histatin 6, which were elevated in AIH patients with respect to both HCs and PBC patients, while S100A12, S100A9 short, cystatin S1, S2, SN and C showed varied levels in PBC with respect to HCs and/or AIH patients. RF analysis evidenced a panel of salivary proteins/peptides able to classify with good accuracy PBC vs. HCs (83.3%), AIH vs. HCs (79.9%) and PBC vs. AIH (80.2%); (4) RF appears to be an attractive machine-learning tool suited for classification of AIH and PBC based on their different salivary proteomic profiles.

Indexed as

Autoimmune DiseasesHepatitis, AutoimmuneLiver Cirrhosis, BiliaryLiver DiseasesBiomarkersHistatinsHumansProteomicsSalivary Proteins and PeptidesBiomarkersHistatinsSalivary Proteins and Peptidesautoimmune hepatitisbiomarkersprimary biliary cholangitisRF analysissalivary proteomicstop-down proteomics

Identifiers

PMID36674470
PMCPMC9866740
OpenAlexW4313584967

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.