Evidence map›Paper›PMID 36673140›Full record

ArticleDiagnostics (Basel, Switzerland)2023

SARS-CoV-2 Detection via RT-PCR in Matched Saliva and Nasopharyngeal Samples Reveals High Concordance in Different Commercial Assays.

Karoline Almeida Felix de Sousa, Carolina Kymie Vasques Nonaka, Renata Naves de Ávila Mendonça, Verena Neiva Mascarenhas, Thamires Gomes Lopes Weber, Carlos Gustavo Regis Silva, Ana Verena Almeida Mendes, Ricardo Khouri, Bruno Solano Freitas Souza, Clarissa Araújo Gurgel Rocha

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Observational
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Karoline Almeida Felix de SousaGonçalo Moniz Institute, Oswaldo Cruz Foundation (FIOCRUZ), Salvador 40296-710, Brazil.ORCID 0000-0002-4226-8625
Carolina Kymie Vasques NonakaCenter for Biotechnology and Cell Therapy, D'Or Institute for Research and Education (IDOR), Salvador 41253-190, Brazil.
Renata Naves de Ávila MendonçaSão Rafael Hospital, Salvador 41253-190, Brazil.
Verena Neiva MascarenhasSão Rafael Hospital, Salvador 41253-190, Brazil.
Thamires Gomes Lopes WeberSão Rafael Hospital, Salvador 41253-190, Brazil.
Carlos Gustavo Regis SilvaGonçalo Moniz Institute, Oswaldo Cruz Foundation (FIOCRUZ), Salvador 40296-710, Brazil.
Ana Verena Almeida MendesSão Rafael Hospital, Salvador 41253-190, Brazil.
Ricardo KhouriGonçalo Moniz Institute, Oswaldo Cruz Foundation (FIOCRUZ), Salvador 40296-710, Brazil.
Bruno Solano Freitas SouzaGonçalo Moniz Institute, Oswaldo Cruz Foundation (FIOCRUZ), Salvador 40296-710, Brazil.
Clarissa Araújo Gurgel RochaGonçalo Moniz Institute, Oswaldo Cruz Foundation (FIOCRUZ), Salvador 40296-710, Brazil.

Funding

Inova Fiocruz VPPIS-005-FIO-20-2-10
6 · The paper itself

Abstract

backgroundSelf-collected saliva samples can increase the diagnostic efficiency and benefit healthcare workers, patient care, and infection control. This study evaluated the performance of self-collected saliva samples compared to nasopharyngeal swabs using three commercial kits for the qualitative detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).

methodsMatched nasopharyngeal and saliva samples were collected from 103 patients with either asymptomatic or symptomatic COVID-19. Both samples were evaluated using three commercial kits (TaqCheck, Allplex, and TaqPath). To evaluate sample stability, viral RNA extraction was performed in the presence or absence of an RNA-stabilizing solution. Storage conditions, including the duration, temperature, and stability after freezing and thawing of the samples, were also evaluated.

resultsAll the saliva samples showed 100% concordance with the nasopharyngeal swab results using TaqCheck and Allplex kits, and 93% using TaqPath kit. No difference was observed in the samples that used the RNA-stabilizing solution compared to the group without the solution. The

conclusionThe high concordance of SARS-CoV-2 detection via reverse transcription-polymerase chain reaction (RT-PCR) in matched saliva and nasopharyngeal samples using different commercial assays reinforces the concept that self-collected saliva samples are non-invasive, rapid, and reliable for diagnosing SARS-CoV-2 infection.

Indexed as

COVID-19diagnostic methodRT-PCRsalivaSARS-CoV-2

Identifiers

PMID36673140
PMCPMC9857954

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.