Evidence map›Paper›PMID 36672781›Full record

ArticleGenes2022

The Role of Alternative Splicing Factors, DDB2-Related Ageing and DNA Damage Repair in the Progression and Prognosis of Stomach Adenocarcinoma Patients.

Xinshu Wang, Zhiyuan Huang, Lei Li, Yuntong Yang, Jiyuan Zhang, Li Wang, Jian Yuan, Yunhui Li

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xinshu WangPostgraduate Training Base of Jinzhou Medical University, Shanghai East Hospital, Shanghai 200120, China.
Zhiyuan HuangResearch Center for Translational Medicine, East Hospital, Tongji University, School of Medicine, Shanghai 200120, China.ORCID 0000-0001-9023-5302
Lei LiResearch Center for Translational Medicine, East Hospital, Tongji University, School of Medicine, Shanghai 200120, China.
Yuntong YangResearch Center for Translational Medicine, East Hospital, Tongji University, School of Medicine, Shanghai 200120, China.
Jiyuan ZhangResearch Center for Translational Medicine, East Hospital, Tongji University, School of Medicine, Shanghai 200120, China.
Li WangResearch Center for Translational Medicine, East Hospital, Tongji University, School of Medicine, Shanghai 200120, China.
Jian YuanResearch Center for Translational Medicine, East Hospital, Tongji University, School of Medicine, Shanghai 200120, China.
Yunhui LiResearch Center for Translational Medicine, East Hospital, Tongji University, School of Medicine, Shanghai 200120, China.
Shanghai East Hospital · CNTongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA damage response is a key signal transduction pathway in triggering ageing and tumor progression. Abnormal alternative splicing (AS) is associated with tumors and ageing. However, the role of AS factors associated with DNA damage repair and ageing in stomach adenocarcinoma (STAD) remains unclear. We downloaded the percentage of splicing (PSI) values for AS in STAD from the TCGA SpliceSeq database. The PSI values of DNA repair gene AS events were integrated with STAD patient survival data for Cox regression analysis. The prediction model for the overall survival (OS) was constructed by the clinical traits. The tumor immune microenvironment was analyzed by CIBERSORT and ESTIMATE. We detected 824 AS events originating from 166 DNA repair genes. Cox regression analysis provided 21 prognostic AS events connected with OS statistically, and a prognostic prediction model was constructed. The expression of these AS factors was higher in STAD tumors.

Indexed as

AdenocarcinomaStomach NeoplasmsAgingAlternative SplicingDNA-Binding ProteinsDNA DamageDNA RepairHumansPrognosisTumor MicroenvironmentDDB2 protein, humanDNA-Binding Proteinsageingalternative splicingDDB2DNA damage responseprognosisSTAD

Identifiers

PMID36672781
PMCPMC9858704
OpenAlexW4312116829

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.