Evidence map›Paper›PMID 36672772›Full record

ArticleGenes2022

Comparative Gene Enrichment Analysis for Drought Tolerance in Contrasting Maize Genotype.

Syed Faheem Anjum Gillani, Adnan Rasheed, Asim Abbasi, Yasir Majeed, Musawer Abbas, Muhammad Umair Hassan, Sameer H Qari, Najat Binothman, Najla Amin T Al Kashgry, Majid Mahmood Tahir and 1 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 9 institutions in 3 countries.

Syed Faheem Anjum GillaniGansu Provincial Key Lab of Arid Land Crop Science, Lanzhou 730070, China.
Adnan RasheedCollege of Agronomy, Hunan Agricultural University, Changsha 410128, China.
Asim AbbasiDepartment of Environmental Sciences, Kohsar University, Murree 47150, Pakistan.ORCID 0000-0003-2731-0490
Yasir MajeedGansu Provincial Key Lab of Arid Land Crop Science, Lanzhou 730070, China.
Musawer AbbasDepartment of Agronomy, University of Agriculture Faisalabad, Faisalabad 38000, Pakistan.
Muhammad Umair HassanResearch Center on Ecological Sciences, Jiangxi Agricultural University, Nanchang 330029, China.
Sameer H QariGenetics and Molecular Biology Central Laboratory, Department of Biology, Aljumum University College, Umm Al-Qura University, Makkah 24243, Saudi Arabia.ORCID 0000-0001-9424-5217
Najat BinothmanDepartment of Chemistry, College of Sciences and Arts, King Abdulaziz University, Rabigh 21911, Saudi Arabia.
Najla Amin T Al KashgryDepartment of Biology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia.
Majid Mahmood TahirDepartment of Soil and Environmental Sciences, Faculty of Agriculture, University of Poonch, Rawalakot 12350, Pakistan.
Yunling PengGansu Provincial Key Lab of Arid Land Crop Science, Lanzhou 730070, China.
Gansu Agricultural University · CNHunan Agricultural University · CNJiangxi Agricultural University · CNKing Abdulaziz University · SAKohsar University MurreeTaif University · SAUmm al-Qura University · SAUniversity of Faisalabad · PKUniversity of Poonch Rawalakot

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drought stress is a significant abiotic factor influencing maize growth and development. Understanding the molecular mechanism of drought tolerance is critical to develop the drought tolerant genotype. The identification of the stress responsive gene is the first step to developing a drought tolerant genotype. The aim of the current research was to pinpoint the genes that are essential for conserved samples in maize drought tolerance. In the current study, inbred lines of maize, 478 and H21, a drought-tolerant and susceptible line, were cultivated in the field and various treatments were applied. The circumstances during the vegetative stage (severe drought, moderate drought and well-watered environments) and RNA sequencing were used to look into their origins. In 478, 68%, 48% and 32% of drought-responsive genes (DRGs) were found, with 63% of DRGs in moderate drought and severe drought conditions in H21, respectively. Gene ontology (GO) keywords were explicitly enriched in the DRGs of H21, which were considerably over-represented in the two lines. According to the results of the GSEA, "phenylpropanoid biosynthesis" was exclusively enriched in H21, but "starch and sucrose metabolism" and "plant hormone signal transduction" were enhanced in both of the two lines. Further investigation found that the various expression patterns of genes linked to the trehalose biosynthesis pathway, reactive oxygen scavenging, and transcription factors, may have a role in maize's ability to withstand drought. Our findings illuminate the molecular ways that respond to lack and offer gene resources for maize drought resistance. Similarly, SNP and correlation analysis gave us noticeable results that urged us to do the same kind of analysis on other crops. Additionally, we isolated particular transcription factors that could control the expression of genes associated to photosynthesis and leaf senescence. According to our findings, a key factor in tolerance is the equilibrium between the induction of leaf senescence and the preservation of photosynthesis under drought.

Indexed as

Drought ResistanceZea maysDroughtsGenotypeTranscription FactorsTranscription Factorsdrought tolerantGO analysisGSEAmaizePCRSNP

Identifiers

PMID36672772
PMCPMC9858524
OpenAlexW4312117140

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.