Evidence map›Paper›PMID 36672708›Full record

ArticleBiomedicines2023

Comparing the Biology of Young versus Old Age Estrogen-Receptor-Positive Breast Cancer through Gene and Protein Expression Analyses.

Alaa Siddig, Wan Faiziah Wan Abdul Rahman, Siti Norasikin Mohd Nafi, Sarina Sulong, Maya Mazuwin Yahya, Tengku Ahmad Damitri Al-Astani Tengku Din, Rozaimi Razali, Kamarul Imran Musa

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In one paragraph

Article in Biomedicines, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Alaa SiddigDepartment of Pathology, School of Medical Sciences, Universiti Sains Malaysia, Kelantan 16150, Malaysia.ORCID 0000-0002-8533-6472
Wan Faiziah Wan Abdul RahmanDepartment of Pathology, School of Medical Sciences, Universiti Sains Malaysia, Kelantan 16150, Malaysia.ORCID 0000-0001-9280-4257
Siti Norasikin Mohd NafiDepartment of Pathology, School of Medical Sciences, Universiti Sains Malaysia, Kelantan 16150, Malaysia.
Sarina SulongHuman Genome Centre, School of Medical Sciences, Universiti Sains Malaysia, Kelantan 16150, Malaysia.
Maya Mazuwin YahyaBreast Cancer Awareness & Research Unit, Hospital Universiti Sains Malaysia, Kelantan 16150, Malaysia.
Tengku Ahmad Damitri Al-Astani Tengku DinBreast Cancer Awareness & Research Unit, Hospital Universiti Sains Malaysia, Kelantan 16150, Malaysia.ORCID 0000-0003-3265-1679
Rozaimi RazaliDepartment of Biomedical Sciences, College of Health Sciences, QU-Health, Qatar University, Doha P.O. Box 2703, Qatar.ORCID 0000-0002-8996-3975
Kamarul Imran MusaDepartment of Community Medicine, School of Medical Sciences, Universiti Sains Malaysia, Kelantan 16150, Malaysia.ORCID 0000-0002-3708-0628
Universiti Sains Malaysia · MYQatar University · QA

Funding

Ministry of Higher Education 203.PPSP.6171249
6 · The paper itself

Abstract

Background: Breast cancer developed at a young age (≤45 years) is hypothesized to have unique biology; however, findings in this field are controversial. Methods: We compared the whole transcriptomic profile of young vs. old-age breast cancer using DNA microarray. RNA was extracted from 13 fresh estrogen receptor (ER)-positive primary breast cancer tissues of untreated patients (7 = young age ≤45 years and 6 = old age ≥55 years). In silico validation for the differentially expressed genes (DEGs) by young-age patients was conducted using The Cancer Genome Atlas (TCGA) database. Next, we analyzed the protein expression encoded by two of the significantly down-regulated genes by young-age patients, Glycine N-acyltransferase-like 1 (GLYATL-1) and Ran-binding protein 3 like (RANBP3L), using immunohistochemical analysis in an independent cohort of 56 and 74 ER-positive pre-therapeutic primary breast cancer tissues, respectively. Results: 12 genes were significantly differentially expressed by young-age breast cancers (fold change >2 or <2- with FDR p-value < 0.05). TCGA data confirmed the differential expression of six genes. Protein expression analysis of GLYATL-1 and RANBP3L did not show heterogeneous expression between young and old-age breast cancer tissues. Loss of expression of GLYATL-1 was significantly (p-value 0.005) associated with positive lymph node status. Higher expression of RANBP3L was significantly associated with breast cancers with lower histopathological grades (p-value 0.038). Conclusions: At the transcriptomic level, breast cancer developed in young and old age patients seems homogenous. The variation in the transcriptomic profiles can be attributed to the other clinicopathological characteristics rather than the age of the patient.

Indexed as

breast cancerestrogen-receptor-positivegene expressionGLYATL-1RANBP3Ltranscriptomic profileyoung age

Identifiers

PMID36672708
PMCPMC9855392
OpenAlexW4315853518

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.